BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042405
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   102   3e-20
ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus ...   101   6e-20
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   100   2e-19
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    92   5e-17
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...    90   2e-16

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  102 bits (254), Expect = 3e-20
 Identities = 68/191 (35%), Positives = 96/191 (50%), Gaps = 16/191 (8%)
 Frame = +2

Query: 2   WCSLIDSTSFVKRHLQRNIQCCPDSRIILRTCPR------GTNFFLTDVQSLCDSPAVEI 163
           WC+LID  +FVK HL+ ++    +  IILRT           N  L D  +L      E+
Sbjct: 31  WCALIDGPNFVKLHLKHSMDTSSNLYIILRTTSHVHYMDFEQNLVLNDCVTL-----KEL 85

Query: 164 EDPVKTYLSGAEFIGSCNGVVCLLKNNIDILLWNPATRKFRELP-TPTNIPPPFGLIGSS 340
             P+  Y  G + +GS NG++C+     DI +WNP+TRK R +P  P  +   FG    S
Sbjct: 86  NHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIELKRYFGTKSCS 145

Query: 341 --VVGFGYDHLNDDYKVVRMYVGQIWG-------MMVTVYSLKNNSWTQAETVSNEIRLT 493
             V GFGYD + DDYK+VR  + Q  G         V VYSL+  SW +   +   +   
Sbjct: 146 VYVFGFGYDSVRDDYKLVR--IAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYP 203

Query: 494 AKRGMYANGSL 526
              G++ANG+L
Sbjct: 204 GANGVFANGAL 214


>ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540308|gb|EEF41879.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
 Frame = +2

Query: 2   WCSLIDSTSFVKRHLQRNIQCCPDSRIIL-RTCPRGT-NFFLTDVQSLCDSPAVEIEDPV 175
           +C+LID+  F+K HL  +IQ  P  ++IL R    G   F+  D       P ++++ P+
Sbjct: 31  YCTLIDNPDFIKAHLDTSIQTKPRKKLILLRHQSNGVAEFYAADHNGGLIDP-IKLKSPI 89

Query: 176 KTYLSGAEFIGSCNGVVCLLKNNIDILLWNPATRKFRELPTPTNIPPPF--GLIGSSVVG 349
           K+  +G   +GSCN +V L++N   +LLWNP T +++ LP P      F    +   V G
Sbjct: 90  KSKSNGTRIVGSCNSLVLLMQNTDKLLLWNPFTTQYKILPEPQREKATFTSQYLQYDVFG 149

Query: 350 FGYDHLNDDYKVVRMYVGQIWGMMVTVYSLKNNSWTQ 460
            GYD  +DDYKVVR+   +     V +YSL++NSWT+
Sbjct: 150 LGYDAASDDYKVVRIQKCRSKKDGVGIYSLRSNSWTR 186


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  100 bits (248), Expect = 2e-19
 Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 12/187 (6%)
 Frame = +2

Query: 2   WCSLIDSTSFVKRHLQRNIQCCPDSRIILRTCPRGTNFF--LTDVQSLCDSPAVEIEDPV 175
           W +LIDS +F+  HL  +I+   +  IIL++    +  F  L ++Q L        + P+
Sbjct: 31  WRTLIDSPTFIYLHLNHSIESPCNLSIILKSSELYSLSFDLLDNIQPL--------DHPL 82

Query: 176 KTYLSGAEFIGSCNGVVCLLKNNIDILLWNPATRKFRELP-TPTNIPPPFGLIGS--SVV 346
             Y  G + +GSCNG++C+     DI LWNP+ R  R +P  P  +   FG+     SV 
Sbjct: 83  MCYNHGVKILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCSCRVSVF 142

Query: 347 GFGYDHLNDDYKVVRMYVGQIWGM-------MVTVYSLKNNSWTQAETVSNEIRLTAKRG 505
           GFGYD  NDDYK+VR  + Q  G+        V V+SL+ NSW +   +   +    + G
Sbjct: 143 GFGYDLSNDDYKLVR--IAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENG 200

Query: 506 MYANGSL 526
           +YANG+L
Sbjct: 201 IYANGAL 207


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 12/174 (6%)
 Frame = +2

Query: 2   WCSLIDSTSFVKRHLQRNIQCCPDSRIILRTCPRGTNFFLTDVQSLCDSPAVEIED-PVK 178
           WC  IDS  F+  HL+R+ Q      +ILR     TN    D+ S  D  ++E+++ P+K
Sbjct: 30  WCKEIDSPYFINTHLKRSSQAHTHLNLILRDA---TNLCTVDLDSP-DFTSIELKNNPLK 85

Query: 179 TYLSGAEFIGSCNGVVCLLKNNIDILLWNPATRKFRELP-TPTNIPPPF--GLIGS--SV 343
           +     E +GSCNG++ LL ++  I L+NP+TR+ + +P +P  +P       + S  + 
Sbjct: 86  SDDCATEVMGSCNGLLALLNSDFSIALYNPSTREKKMIPVSPLELPNDLDDSKVSSLFNF 145

Query: 344 VGFGYDHLNDDYKVVRM--YVGQ----IWGMMVTVYSLKNNSWTQAETVSNEIR 487
            GFG+D +N+DYKVVR   + G      +   V VYSLK+NSW + +    ++R
Sbjct: 146 YGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDLR 199


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 14/179 (7%)
 Frame = +2

Query: 5   CSLIDSTSFVKRHLQRNIQCCPDSRIILRTCPRGTNFFLTDVQSLCD-SPAVE--IEDPV 175
           CSLIDS  F+  HL  +++   +  +ILR      N +  D  SL   SPA    +  P+
Sbjct: 32  CSLIDSPDFIDHHLSHSLKTRSNLFLILRDW----NLYTLDFDSLSSVSPAAADVLIHPL 87

Query: 176 KTYLSGAEFIGSCNGVVCLLKNNIDILLWNPATRKFRELPTPTNIPPP--FGLIGSSVVG 349
           +    G E +GSCNG++ L  +  D+ L+NPATRK++ +P  + I PP      G    G
Sbjct: 88  QKG-GGTEAVGSCNGLLALRNSERDLALYNPATRKYKRVPV-SEIEPPDRNSKTGYVFYG 145

Query: 350 FGYDHLNDDYKVVRM--YVGQ-------IWGMMVTVYSLKNNSWTQAETVSNEIRLTAK 499
           FG+D +++DY+++RM  +VG+        +   V VYSLKN+SW + + +   +R   K
Sbjct: 146 FGFDSVSEDYRLIRMATFVGEDDRCESFDYEYQVQVYSLKNDSWKRIKGLPYYLRFLYK 204