BLASTX nr result

ID: Cnidium21_contig00042400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042400
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    67   2e-09
gb|ACU22680.1| unknown [Glycine max]                                   67   2e-09
ref|XP_003599631.1| F-box [Medicago truncatula] gi|357458723|ref...    66   3e-09
ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003599210.1| F-box/kelch-repeat protein [Medicago truncat...    63   3e-08

>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +1

Query: 31  NNSDSNIIVSLDIKTETYQQVLLPKYEEGASNWTLGTFENNLSLLYKFSTFADFWVKKEC 210
           N+S S IIVSLD+  E+Y++VL P Y     N TLG   + L +L    TF D W+ K+ 
Sbjct: 255 NDSSSLIIVSLDLHKESYEEVLQPYYGVAVVNLTLGVLRDCLCVLSHADTFLDVWLMKDY 314

Query: 211 VKEEPWMKLFTIPY 252
             +E W KLF +PY
Sbjct: 315 GNKESWTKLFRVPY 328


>gb|ACU22680.1| unknown [Glycine max]
          Length = 393

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +1

Query: 31  NNSDSNIIVSLDIKTETYQQVLLPKYEEGASNWTLGTFENNLSLLYKFSTFADFWVKKEC 210
           N+S S IIVSLD+  E+Y++VL P Y     N TLG   + L +L    TF D W+ K+ 
Sbjct: 255 NDSSSLIIVSLDLHKESYEEVLQPYYGVAVVNLTLGVLRDCLCVLSHADTFLDVWLMKDY 314

Query: 211 VKEEPWMKLFTIPY 252
             +E W KLF +PY
Sbjct: 315 GNKESWTKLFRVPY 328


>ref|XP_003599631.1| F-box [Medicago truncatula] gi|357458723|ref|XP_003599642.1| F-box
           [Medicago truncatula] gi|355488679|gb|AES69882.1| F-box
           [Medicago truncatula] gi|355488690|gb|AES69893.1| F-box
           [Medicago truncatula]
          Length = 350

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
 Frame = +1

Query: 34  NSDSNIIVSLDIKTETYQQVLLPKYEEGASNWTLGTFENNLSLLYKFSTFADFWVKKECV 213
           +S S+I++SLD + E+YQ++  P  E     WTLG  ++ LS+    + F D W+  EC 
Sbjct: 210 DSRSSIVISLDFEKESYQKLSHPNVETNC--WTLGVLKDCLSIFAYTNMFVDVWIMNECG 267

Query: 214 KEEPWMKLFTIPYK----NGPIKGDLYI---HSIISIYVNHGIILNL 333
             +PW KL+ +PY     N P    LYI     ++  + +H    NL
Sbjct: 268 NNQPWTKLYHVPYMVYRGNRPYCTPLYITEDDQVLMYFHDHSTHTNL 314


>ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis]
           gi|223543892|gb|EEF45418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
 Frame = +1

Query: 49  IIVSLDIKTETYQQVLLPKYEEGASNWTLGTFENNLSLLYKF-STFADFWVKKECVKEEP 225
           IIVS DIK ETY++V+ P Y E   + TLG  +  L ++  + +  ADFWV KE    E 
Sbjct: 179 IIVSFDIKRETYKEVMQPDYGELVYDRTLGVLDGCLCVMCNYHAVRADFWVMKEYGVRES 238

Query: 226 WMKLFTIPYKNGPIKGDLYI-HSIISIYVNHGIILNLDMVSCMELY 360
           W++L T+PY + P  G L++ +S+     ++G +L L+  S + +Y
Sbjct: 239 WIRLVTVPYLDYP--GSLHLQYSVPYAIADNGEVL-LEFKSSLVIY 281


>ref|XP_003599210.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355488258|gb|AES69461.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 378

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/71 (42%), Positives = 42/71 (59%)
 Frame = +1

Query: 37  SDSNIIVSLDIKTETYQQVLLPKYEEGASNWTLGTFENNLSLLYKFSTFADFWVKKECVK 216
           SD + I+SLD++ E+YQQVLLP  E     W LG   N L +L   + F D W+  E   
Sbjct: 241 SDDSFILSLDVEKESYQQVLLPDTENDL--WILGVLRNCLCILATSNLFLDVWIMNEYGN 298

Query: 217 EEPWMKLFTIP 249
           +E W KL+++P
Sbjct: 299 QESWTKLYSVP 309


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