BLASTX nr result

ID: Cnidium21_contig00042396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042396
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   235   6e-60
emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera]   226   5e-57
ref|XP_003629742.1| Pentatricopeptide repeat-containing protein ...   221   2e-55
ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi...   220   2e-55
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi...   220   2e-55

>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  235 bits (600), Expect = 6e-60
 Identities = 107/153 (69%), Positives = 128/153 (83%)
 Frame = +1

Query: 1   DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180
           DV++VRK +R KGLKKNP CS+VEGK G+IHEF AGD+ HP+S EIKQ LE+LLD+LK+ 
Sbjct: 495 DVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYL 554

Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360
           GYQP LSSV YD+ D+EK R+LM+HSEKLA ++GLLT  +G +I IVKNLRICEDCH  M
Sbjct: 555 GYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVM 614

Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSCNNFW 459
           CGAS +TGR I++RDNMRFHHF DG CSC NFW
Sbjct: 615 CGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647


>emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera]
          Length = 228

 Score =  226 bits (575), Expect = 5e-57
 Identities = 104/149 (69%), Positives = 125/149 (83%)
 Frame = +1

Query: 1   DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180
           DV++VRK +R KGLKKNP CS+VEGK G+IHEF AGD+ HP+S EIKQ LE+LLD+LK+ 
Sbjct: 35  DVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYL 94

Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360
           GYQP LSSV YD+ D+EK R+LM+HSEKLA ++GLLT  +G +I IVKNLRICEDCH  M
Sbjct: 95  GYQPNLSSVAYDIIDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVM 154

Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSC 447
           CGAS +TGR I++RDNMRFHHF DG CSC
Sbjct: 155 CGASQITGREIVVRDNMRFHHFRDGGCSC 183


>ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523764|gb|AET04218.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  221 bits (562), Expect = 2e-55
 Identities = 101/153 (66%), Positives = 128/153 (83%)
 Frame = +1

Query: 1   DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180
           DV+RVRK +R K L+KNP CS+VE K+G+IHEF AGD+ HP  +EIK+ L++LL +LK  
Sbjct: 464 DVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCT 523

Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360
           GYQP L+SVPYD+DD+ K  +L++HSEKLA +YGLL+  +GS+I I+KNLRICEDCH+ M
Sbjct: 524 GYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLSTDAGSTIKIMKNLRICEDCHIVM 583

Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSCNNFW 459
           CGAS +TGR II+RDNMRFHHF +GACSCNNFW
Sbjct: 584 CGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616


>ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  220 bits (561), Expect = 2e-55
 Identities = 97/153 (63%), Positives = 122/153 (79%)
 Frame = +1

Query: 1   DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180
           +V+++RK +R KG KKNP CS+ EGK+G IH+F AGD  HPRSSEI+Q L+ L+++L+ H
Sbjct: 498 EVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSH 557

Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360
           GY+P L S PYD+ D EK RILM+HSEKLA +YGLL   +G +I I+KN+RICEDCH  M
Sbjct: 558 GYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVM 617

Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSCNNFW 459
           C AS +TGR II+RDNMRFHHFH+G CSC NFW
Sbjct: 618 CAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650


>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  220 bits (561), Expect = 2e-55
 Identities = 97/153 (63%), Positives = 122/153 (79%)
 Frame = +1

Query: 1   DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180
           +V+++RK +R KG KKNP CS+ EGK+G IH+F AGD  HPRSSEI+Q L+ L+++L+ H
Sbjct: 498 EVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSH 557

Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360
           GY+P L S PYD+ D EK RILM+HSEKLA +YGLL   +G +I I+KN+RICEDCH  M
Sbjct: 558 GYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVM 617

Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSCNNFW 459
           C AS +TGR II+RDNMRFHHFH+G CSC NFW
Sbjct: 618 CAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650


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