BLASTX nr result
ID: Cnidium21_contig00042396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00042396 (738 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi... 235 6e-60 emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera] 226 5e-57 ref|XP_003629742.1| Pentatricopeptide repeat-containing protein ... 221 2e-55 ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi... 220 2e-55 ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi... 220 2e-55 >ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like [Vitis vinifera] Length = 647 Score = 235 bits (600), Expect = 6e-60 Identities = 107/153 (69%), Positives = 128/153 (83%) Frame = +1 Query: 1 DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180 DV++VRK +R KGLKKNP CS+VEGK G+IHEF AGD+ HP+S EIKQ LE+LLD+LK+ Sbjct: 495 DVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYL 554 Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360 GYQP LSSV YD+ D+EK R+LM+HSEKLA ++GLLT +G +I IVKNLRICEDCH M Sbjct: 555 GYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVM 614 Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSCNNFW 459 CGAS +TGR I++RDNMRFHHF DG CSC NFW Sbjct: 615 CGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647 >emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera] Length = 228 Score = 226 bits (575), Expect = 5e-57 Identities = 104/149 (69%), Positives = 125/149 (83%) Frame = +1 Query: 1 DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180 DV++VRK +R KGLKKNP CS+VEGK G+IHEF AGD+ HP+S EIKQ LE+LLD+LK+ Sbjct: 35 DVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYL 94 Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360 GYQP LSSV YD+ D+EK R+LM+HSEKLA ++GLLT +G +I IVKNLRICEDCH M Sbjct: 95 GYQPNLSSVAYDIIDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVM 154 Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSC 447 CGAS +TGR I++RDNMRFHHF DG CSC Sbjct: 155 CGASQITGREIVVRDNMRFHHFRDGGCSC 183 >ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 616 Score = 221 bits (562), Expect = 2e-55 Identities = 101/153 (66%), Positives = 128/153 (83%) Frame = +1 Query: 1 DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180 DV+RVRK +R K L+KNP CS+VE K+G+IHEF AGD+ HP +EIK+ L++LL +LK Sbjct: 464 DVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCT 523 Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360 GYQP L+SVPYD+DD+ K +L++HSEKLA +YGLL+ +GS+I I+KNLRICEDCH+ M Sbjct: 524 GYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLSTDAGSTIKIMKNLRICEDCHIVM 583 Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSCNNFW 459 CGAS +TGR II+RDNMRFHHF +GACSCNNFW Sbjct: 584 CGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616 >ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like [Cucumis sativus] Length = 650 Score = 220 bits (561), Expect = 2e-55 Identities = 97/153 (63%), Positives = 122/153 (79%) Frame = +1 Query: 1 DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180 +V+++RK +R KG KKNP CS+ EGK+G IH+F AGD HPRSSEI+Q L+ L+++L+ H Sbjct: 498 EVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSH 557 Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360 GY+P L S PYD+ D EK RILM+HSEKLA +YGLL +G +I I+KN+RICEDCH M Sbjct: 558 GYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVM 617 Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSCNNFW 459 C AS +TGR II+RDNMRFHHFH+G CSC NFW Sbjct: 618 CAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650 >ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like [Cucumis sativus] Length = 650 Score = 220 bits (561), Expect = 2e-55 Identities = 97/153 (63%), Positives = 122/153 (79%) Frame = +1 Query: 1 DVARVRKAVRMKGLKKNPACSFVEGKDGLIHEFLAGDLVHPRSSEIKQELENLLDKLKFH 180 +V+++RK +R KG KKNP CS+ EGK+G IH+F AGD HPRSSEI+Q L+ L+++L+ H Sbjct: 498 EVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSH 557 Query: 181 GYQPVLSSVPYDVDDKEKVRILMAHSEKLAFSYGLLTVASGSSITIVKNLRICEDCHLFM 360 GY+P L S PYD+ D EK RILM+HSEKLA +YGLL +G +I I+KN+RICEDCH M Sbjct: 558 GYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVM 617 Query: 361 CGASWVTGRNIIIRDNMRFHHFHDGACSCNNFW 459 C AS +TGR II+RDNMRFHHFH+G CSC NFW Sbjct: 618 CAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650