BLASTX nr result

ID: Cnidium21_contig00042389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042389
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299599.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isofo...   192   4e-47
emb|CAN69466.1| hypothetical protein VITISV_042553 [Vitis vinifera]   192   4e-47
ref|XP_002521348.1| Ran GTPase binding protein, putative [Ricinu...   191   6e-47
ref|XP_002304146.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46

>ref|XP_002299599.1| predicted protein [Populus trichocarpa] gi|222846857|gb|EEE84404.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  193 bits (491), Expect = 1e-47
 Identities = 105/178 (58%), Positives = 127/178 (71%), Gaps = 8/178 (4%)
 Frame = +2

Query: 38  MLTCIACSKHIGGGSLPPQHPDEDDNDDVLDQPPVTTPTSKPHSIKALTSQIKDIALKP- 214
           MLTCIACSK +  GSL  +  +ED     +D   + TP +K  +IKALT+QIKD+A+K  
Sbjct: 1   MLTCIACSKQLNNGSLQQREREED-----VDVAALETPRTK-QAIKALTAQIKDMAVKAS 54

Query: 215 -----CKPCSGSTASKPTRNYPDSETASE--RFYCSYRRTGSADSTPRVWGKEMEARLKG 373
                CKPCSGS+ +   RNY +S+ AS+  RF+CSYRRTGS++STPR+WGKEMEARLKG
Sbjct: 55  GAYRNCKPCSGSSNNNSNRNYAESDAASDSARFHCSYRRTGSSNSTPRMWGKEMEARLKG 114

Query: 374 LSSGQNTPTSISGRTESVVFXXXXXXXXXXPKEWVAQVEPGVLITFVSLPNNGNDLKR 547
           LS G+ TP S+SGRTESV F          PKEWVAQVEPGVLI F SLP+ GNDLKR
Sbjct: 115 LSGGEGTPASVSGRTESVAF-----MEEDEPKEWVAQVEPGVLIAFHSLPDGGNDLKR 167


>ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isoform 2 [Vitis vinifera]
           gi|297743026|emb|CBI35893.3| unnamed protein product
           [Vitis vinifera]
          Length = 371

 Score =  192 bits (487), Expect = 4e-47
 Identities = 107/178 (60%), Positives = 124/178 (69%), Gaps = 8/178 (4%)
 Frame = +2

Query: 38  MLTCIACSKHIGGGSLPPQHPDEDDNDDVLDQPPVTTPTSKPHSIKALTSQIKDIALKP- 214
           MLTCIACSK + G SL  Q   E +         V TP++K H+IKALT+QIKD+ALK  
Sbjct: 1   MLTCIACSKQVSGRSLHEQEEGEGE--------AVATPSTK-HAIKALTAQIKDMALKAS 51

Query: 215 -----CKPCSGSTASKPTRNYPDSETASE--RFYCSYRRTGSADSTPRVWGKEMEARLKG 373
                CKPCSGS+     RNY DSE+AS+  RF+CSYRRTGS+ STPR+ GKEMEAR K 
Sbjct: 52  GAYRNCKPCSGSSGQNQDRNYADSESASDSARFHCSYRRTGSSSSTPRLLGKEMEARSKR 111

Query: 374 LSSGQNTPTSISGRTESVVFXXXXXXXXXXPKEWVAQVEPGVLITFVSLPNNGNDLKR 547
           LSSG+ TP S+SGR ESVVF          PKEW+AQVEPGVLITFVS+P  GNDLKR
Sbjct: 112 LSSGEGTPASVSGRAESVVF-----MEEDEPKEWIAQVEPGVLITFVSMPQGGNDLKR 164


>emb|CAN69466.1| hypothetical protein VITISV_042553 [Vitis vinifera]
          Length = 363

 Score =  192 bits (487), Expect = 4e-47
 Identities = 107/178 (60%), Positives = 124/178 (69%), Gaps = 8/178 (4%)
 Frame = +2

Query: 38  MLTCIACSKHIGGGSLPPQHPDEDDNDDVLDQPPVTTPTSKPHSIKALTSQIKDIALKP- 214
           MLTCIACSK + G SL  Q   E +         V TP++K H+IKALT+QIKD+ALK  
Sbjct: 1   MLTCIACSKQVSGRSLHEQEEGEGE--------AVATPSTK-HAIKALTAQIKDMALKAS 51

Query: 215 -----CKPCSGSTASKPTRNYPDSETASE--RFYCSYRRTGSADSTPRVWGKEMEARLKG 373
                CKPCSGS+     RNY DSE+AS+  RF+CSYRRTGS+ STPR+ GKEMEAR K 
Sbjct: 52  GAYRNCKPCSGSSGQNQDRNYADSESASDSARFHCSYRRTGSSSSTPRLLGKEMEARSKR 111

Query: 374 LSSGQNTPTSISGRTESVVFXXXXXXXXXXPKEWVAQVEPGVLITFVSLPNNGNDLKR 547
           LSSG+ TP S+SGR ESVVF          PKEW+AQVEPGVLITFVS+P  GNDLKR
Sbjct: 112 LSSGEGTPASVSGRAESVVF-----MEEDEPKEWIAQVEPGVLITFVSMPQGGNDLKR 164


>ref|XP_002521348.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223539426|gb|EEF41016.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 372

 Score =  191 bits (485), Expect = 6e-47
 Identities = 105/179 (58%), Positives = 128/179 (71%), Gaps = 9/179 (5%)
 Frame = +2

Query: 38  MLTCIACSKHIGGGSLPPQHPDEDDNDDVLDQPPVTTPTSKPHSIKALTSQIKDIALKP- 214
           MLTCIACSK +  GSL  +  +EDD+D       + TP ++  +IKA+T+QIKD+A+K  
Sbjct: 1   MLTCIACSKQLNNGSLHQREREEDDDD------AMETPRTR-QTIKAITAQIKDMAIKAS 53

Query: 215 -----CKPCSGSTASKPTRNYPDSETASE--RFYCSYRRTGSADSTPRVWGKEMEARLKG 373
                CKPCSGS+ +    NY +S+  S+  RF+CSYRRTGS++STPR+WGKEMEARLKG
Sbjct: 54  GAYRNCKPCSGSSNNNHNENYAESDAISDSARFHCSYRRTGSSNSTPRLWGKEMEARLKG 113

Query: 374 L-SSGQNTPTSISGRTESVVFXXXXXXXXXXPKEWVAQVEPGVLITFVSLPNNGNDLKR 547
           L SSG+ TP S+SGR ESVVF          PKEWVAQVEPGVLITFVSLP  GNDLKR
Sbjct: 114 LSSSGEGTPASVSGRAESVVF-----MEEEEPKEWVAQVEPGVLITFVSLPQGGNDLKR 167


>ref|XP_002304146.1| predicted protein [Populus trichocarpa] gi|222841578|gb|EEE79125.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  189 bits (479), Expect = 3e-46
 Identities = 103/178 (57%), Positives = 126/178 (70%), Gaps = 8/178 (4%)
 Frame = +2

Query: 38  MLTCIACSKHIGGGSLPPQHPDEDDNDDVLDQPPVTTPTSKPHSIKALTSQIKDIALKP- 214
           MLTCIACSK +     PP+  +ED     +D     T  +K H++KALT+Q+KD+A+K  
Sbjct: 1   MLTCIACSKRLNNRCSPPRDREED-----VDVAAFETLRTK-HAMKALTAQMKDMAVKAS 54

Query: 215 -----CKPCSGSTASKPTRNYPDSETASE--RFYCSYRRTGSADSTPRVWGKEMEARLKG 373
                CKPCSGS+++   RNY +S+ AS+  RF+C YRR GS++STPR WGKE EARLKG
Sbjct: 55  GAYRNCKPCSGSSSNNNNRNYAESDAASDSARFHCLYRRAGSSNSTPRKWGKESEARLKG 114

Query: 374 LSSGQNTPTSISGRTESVVFXXXXXXXXXXPKEWVAQVEPGVLITFVSLPNNGNDLKR 547
           LSSG+ TP S+SGRTESVVF          PKEWVAQVEPGVLITFVSLP+ GNDLKR
Sbjct: 115 LSSGEGTPASVSGRTESVVF-----MEEDEPKEWVAQVEPGVLITFVSLPDGGNDLKR 167


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