BLASTX nr result

ID: Cnidium21_contig00042380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042380
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD65046.1| hypothetical protein 26.t00107 [Brassica oleracea]      55   5e-06
ref|XP_002862374.1| hypothetical protein ARALYDRAFT_920829 [Arab...    55   5e-06

>gb|ABD65046.1| hypothetical protein 26.t00107 [Brassica oleracea]
          Length = 262

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
 Frame = +1

Query: 22  YRVTMEVEDSTSSTTVVLFDKHVMKMINISAQHI-LTNDKNATPEMIPSVLNNMLGKKYI 198
           +RV + V+D   + T V+FDK + K+    A  + L  D N   + +P  L  + GK+++
Sbjct: 116 FRVELAVDDGKDTATFVVFDKEMTKLTGKEAAVLALDEDPNGEGDELPRCLEELAGKEFV 175

Query: 199 FQLSLTIYNTVKKKERYTVTQVEEVKSIEVI----NVHVVPNEQPD 324
           FQ+ +T +N       +TV+ + E  ++E      + +++PN + +
Sbjct: 176 FQIRVTPFNFTPNHRTFTVSTITEYNTLETCGKEHDDNILPNREAE 221


>ref|XP_002862374.1| hypothetical protein ARALYDRAFT_920829 [Arabidopsis lyrata subsp.
           lyrata] gi|297307823|gb|EFH38632.1| hypothetical protein
           ARALYDRAFT_920829 [Arabidopsis lyrata subsp. lyrata]
          Length = 201

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +1

Query: 22  YRVTMEVEDSTSSTTVVLFDKHVMKMIN-ISAQHILTNDKNATPEMIPSVLNNMLGKKYI 198
           YRV + V D     T V+FD  + K+    +A  IL N    T + IPS + ++ GK+++
Sbjct: 110 YRVELAVHDGHDEATFVVFDNEMTKLTTKTAATLILENGNGGTRDDIPSCIEDLTGKQFL 169

Query: 199 FQLSLTIYNTVKKKERYTVTQVEE 270
           FQ+ +T +N   K   +TV+++ E
Sbjct: 170 FQIKVTPFNFSSKHRTFTVSKLSE 193


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