BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042373
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_002520828.1| pentatricopeptide repeat-containing protein,...   147   9e-34
emb|CBI16742.3| unnamed protein product [Vitis vinifera]              147   1e-33
emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]   147   1e-33
ref|XP_003559133.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27

>ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09410-like [Glycine max]
          Length = 669

 Score =  149 bits (376), Expect = 2e-34
 Identities = 78/131 (59%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3   KAFKLLVHML-NCFHIRPNETTLTSVLISCKESISELLQAHALVIRLGFVQSTSLMNALV 179
           +A  L V ML +CF  RPNETT+TSV+ SC + + EL+QAHA+VI LGF  +T L NAL+
Sbjct: 362 EALNLFVLMLRSCF--RPNETTMTSVVTSC-DGMVELMQAHAMVIHLGFEHNTWLTNALI 418

Query: 180 SMYSRIGDVKSSWLAFNDLESKDVVSWTAMILSYSIHGYGSQSLQAFARMLRSGTTPDDI 359
           ++YS+ GD+ S+ L F  L+SKDVVSWTAMI++YS HG+G  +LQ FARML SG  PD++
Sbjct: 419 TLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEV 478

Query: 360 TFVGVLTACSH 392
           TFVG+L+ACSH
Sbjct: 479 TFVGLLSACSH 489


>ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539959|gb|EEF41537.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 656

 Score =  147 bits (371), Expect = 9e-34
 Identities = 78/129 (60%), Positives = 95/129 (73%)
 Frame = +3

Query: 6   AFKLLVHMLNCFHIRPNETTLTSVLISCKESISELLQAHALVIRLGFVQSTSLMNALVSM 185
           + + L+ ML   + +PNETT+TSVL +C +SI EL+QAH LVI LGF Q   L N LV+ 
Sbjct: 349 SLRYLILMLRS-NFKPNETTITSVLTAC-DSILELMQAHGLVIHLGFEQDKVLANGLVTT 406

Query: 186 YSRIGDVKSSWLAFNDLESKDVVSWTAMILSYSIHGYGSQSLQAFARMLRSGTTPDDITF 365
           YSR GDV S+   F+ LE KD+VSWTAMIL+YS HG G  +LQ FARMLRSG  PD ITF
Sbjct: 407 YSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITF 466

Query: 366 VGVLTACSH 392
           VG+L+ACSH
Sbjct: 467 VGLLSACSH 475


>emb|CBI16742.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  147 bits (370), Expect = 1e-33
 Identities = 76/130 (58%), Positives = 98/130 (75%)
 Frame = +3

Query: 3   KAFKLLVHMLNCFHIRPNETTLTSVLISCKESISELLQAHALVIRLGFVQSTSLMNALVS 182
           +A K L+ ML    IRPNETT+T +L SC   + EL+QAHAL I +G    TSL NAL++
Sbjct: 366 EAMKHLILMLRSC-IRPNETTMTIILTSCWGML-ELMQAHALAIVVGCECETSLSNALIT 423

Query: 183 MYSRIGDVKSSWLAFNDLESKDVVSWTAMILSYSIHGYGSQSLQAFARMLRSGTTPDDIT 362
           MYSRIGD+ SS +AF  L++KDVVSWTAM+L+++ HG+G  +L  F  ML+SGT PD+IT
Sbjct: 424 MYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEIT 483

Query: 363 FVGVLTACSH 392
           FVGVL+ACSH
Sbjct: 484 FVGVLSACSH 493


>emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
          Length = 932

 Score =  147 bits (370), Expect = 1e-33
 Identities = 76/130 (58%), Positives = 98/130 (75%)
 Frame = +3

Query: 3   KAFKLLVHMLNCFHIRPNETTLTSVLISCKESISELLQAHALVIRLGFVQSTSLMNALVS 182
           +A K L+ ML    IRPNETT+T +L SC   + EL+QAHAL I +G    TSL NAL++
Sbjct: 272 EAMKHLILMLRSC-IRPNETTMTIILTSCWGML-ELMQAHALAIVVGCECETSLSNALIT 329

Query: 183 MYSRIGDVKSSWLAFNDLESKDVVSWTAMILSYSIHGYGSQSLQAFARMLRSGTTPDDIT 362
           MYSRIGD+ SS +AF  L++KDVVSWTAM+L+++ HG+G  +L  F  ML+SGT PD+IT
Sbjct: 330 MYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEIT 389

Query: 363 FVGVLTACSH 392
           FVGVL+ACSH
Sbjct: 390 FVGVLSACSH 399


>ref|XP_003559133.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Brachypodium distachyon]
          Length = 640

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/114 (54%), Positives = 81/114 (71%)
 Frame = +3

Query: 51  PNETTLTSVLISCKESISELLQAHALVIRLGFVQSTSLMNALVSMYSRIGDVKSSWLAFN 230
           PN TTL SVL+   ES+ E++Q H L   LG +  TSL NAL++MYSRIGD+ S+WLAF 
Sbjct: 350 PNSTTLISVLV-ISESMVEVVQIHGLATTLGLLSETSLGNALLTMYSRIGDLPSAWLAFK 408

Query: 231 DLESKDVVSWTAMILSYSIHGYGSQSLQAFARMLRSGTTPDDITFVGVLTACSH 392
            LE KD ++WT+MI +++ HG+ S +LQAFA+ML  G  P   TF  VL+ACSH
Sbjct: 409 RLEEKDAITWTSMIQAFANHGHASYALQAFAQMLEHGKNPSSTTFTAVLSACSH 462