BLASTX nr result

ID: Cnidium21_contig00042349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042349
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216...    86   3e-15
gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. m...    85   7e-15
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...    83   3e-14

>ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus]
          Length = 1218

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/45 (88%), Positives = 44/45 (97%)
 Frame = +3

Query: 255 DEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389
           D+GLKKLEYLSLVSKVC+ELE+HLGFGDKVLAEFITE+GR CESV
Sbjct: 9   DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESV 53


>gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. melo]
          Length = 953

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = +3

Query: 255 DEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389
           D+GLKKLEYLSLVSKVC+ELE+HLGFGDKVLAEFITE+GR CE+V
Sbjct: 9   DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETV 53


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = +3

Query: 255 DEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389
           D GLKKLEYLSLVSKVC+ELE+HLGFGDK+LAEFITELGR CE+V
Sbjct: 8   DAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETV 52


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = +3

Query: 237 MASEVKDEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389
           +A+   D GLKKLEYLSLVSKVC+ELE+HLGFGDK+LAEFITELGR C++V
Sbjct: 2   VAAGENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCDTV 52


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/51 (74%), Positives = 47/51 (92%)
 Frame = +3

Query: 237 MASEVKDEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389
           M+ + +++GLKKLEYLSLVSKVCTELE+HLG GDKVLAEFIT++GR CE+V
Sbjct: 1   MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETV 51


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