BLASTX nr result
ID: Cnidium21_contig00042349
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00042349 (389 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216... 86 3e-15 gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. m... 85 7e-15 ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2... 84 1e-14 ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2... 84 2e-14 ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor... 83 3e-14 >ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus] Length = 1218 Score = 85.9 bits (211), Expect = 3e-15 Identities = 40/45 (88%), Positives = 44/45 (97%) Frame = +3 Query: 255 DEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389 D+GLKKLEYLSLVSKVC+ELE+HLGFGDKVLAEFITE+GR CESV Sbjct: 9 DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESV 53 >gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. melo] Length = 953 Score = 84.7 bits (208), Expect = 7e-15 Identities = 39/45 (86%), Positives = 44/45 (97%) Frame = +3 Query: 255 DEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389 D+GLKKLEYLSLVSKVC+ELE+HLGFGDKVLAEFITE+GR CE+V Sbjct: 9 DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETV 53 >ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1| predicted protein [Populus trichocarpa] Length = 1171 Score = 84.0 bits (206), Expect = 1e-14 Identities = 39/45 (86%), Positives = 43/45 (95%) Frame = +3 Query: 255 DEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389 D GLKKLEYLSLVSKVC+ELE+HLGFGDK+LAEFITELGR CE+V Sbjct: 8 DAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETV 52 >ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1| predicted protein [Populus trichocarpa] Length = 1207 Score = 83.6 bits (205), Expect = 2e-14 Identities = 39/51 (76%), Positives = 46/51 (90%) Frame = +3 Query: 237 MASEVKDEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389 +A+ D GLKKLEYLSLVSKVC+ELE+HLGFGDK+LAEFITELGR C++V Sbjct: 2 VAAGENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCDTV 52 >ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like [Vitis vinifera] Length = 1172 Score = 82.8 bits (203), Expect = 3e-14 Identities = 38/51 (74%), Positives = 47/51 (92%) Frame = +3 Query: 237 MASEVKDEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESV 389 M+ + +++GLKKLEYLSLVSKVCTELE+HLG GDKVLAEFIT++GR CE+V Sbjct: 1 MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETV 51