BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042333
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L...   113   2e-23
ref|XP_002328216.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group] g...   110   9e-23
ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60...   110   9e-23
ref|XP_004060383.1| PREDICTED: ubiquitin-60S ribosomal protein L...   109   2e-22

>ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
           distachyon]
          Length = 218

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/107 (52%), Positives = 79/107 (73%)
 Frame = -3

Query: 322 LSVRMQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVV 143
           L  +MQ+FVK L GKT+TLEVE SDT+ +VK+ +  K+GIP +QQ LIFAGK+L+D   +
Sbjct: 73  LRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTL 132

Query: 142 NDYDIHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2
            DY+I +E+TLHL  +L GG  G Q+ +N +P L  LAQK+N+ K++
Sbjct: 133 ADYNIQKESTLHLVLRLRGGSRG-QYPKNLEPNLRILAQKYNENKMV 178



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/73 (57%), Positives = 56/73 (76%)
 Frame = -3

Query: 310 MQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVVNDYD 131
           MQ+FVK L GKT+TLEVE  DT+  VK+ ++ K+GIP +QQ LIFAGK+LDD   + DY+
Sbjct: 1   MQIFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 130 IHREATLHLASKL 92
           I +E+TLHL  +L
Sbjct: 61  IQKESTLHLVLRL 73


>ref|XP_002328216.1| predicted protein [Populus trichocarpa] gi|222837731|gb|EEE76096.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/103 (56%), Positives = 74/103 (71%)
 Frame = -3

Query: 310 MQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVVNDYD 131
           MQ+FVK L GK +TLEVE S TV +VK+ ++ K+GIP  QQ LIFAGK+L+D+  +  YD
Sbjct: 1   MQIFVKTLTGKAVTLEVESSYTVDNVKAKIQDKEGIPPEQQRLIFAGKQLEDSRTLASYD 60

Query: 130 IHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2
           I +E+TLHL  +L GGKG        +P L ELA+KFNQYKLI
Sbjct: 61  IQKESTLHLVLRLRGGKGAPS--MKIEPSLRELARKFNQYKLI 101


>ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group]
           gi|51535937|dbj|BAD38019.1| putative ubiquitin /
           ribosomal protein CEP52 [Oryza sativa Japonica Group]
           gi|113631570|dbj|BAF25251.1| Os09g0452700 [Oryza sativa
           Japonica Group] gi|125563958|gb|EAZ09338.1| hypothetical
           protein OsI_31610 [Oryza sativa Indica Group]
           gi|125605917|gb|EAZ44953.1| hypothetical protein
           OsJ_29596 [Oryza sativa Japonica Group]
          Length = 140

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/103 (53%), Positives = 77/103 (74%)
 Frame = -3

Query: 310 MQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVVNDYD 131
           MQ+FVK L GKT+TLEVE SDT+ +VK+ ++ K+GIP +QQ LIFAGK+L+D   + DY+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 130 IHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2
           I +E+TLHL  +L GG  G  + +  +P L ELAQK+N+ KL+
Sbjct: 61  IQKESTLHLVLRLRGGSRG-GYPKGIEPNLRELAQKYNENKLV 102


>ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 213

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/107 (52%), Positives = 79/107 (73%)
 Frame = -3

Query: 322 LSVRMQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVV 143
           L  RM +FVK L GKT+TLEVE SDT+ +VK+ ++ K+GIP +QQ LIFAGK+LDD   +
Sbjct: 73  LQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTL 132

Query: 142 NDYDIHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2
            DY+I +E+TLHL  +L GG+G   + R  +P L++LA K+N+ K+I
Sbjct: 133 ADYNIQKESTLHLVLRLRGGRG--CYPRRIEPTLLKLALKYNERKMI 177



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/75 (54%), Positives = 56/75 (74%)
 Frame = -3

Query: 310 MQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVVNDYD 131
           MQ+FVK L GKT+TLEVE SD + +VK+ ++ K+GIP  QQ LIFAGK+LD+   + D +
Sbjct: 1   MQIFVKTLTGKTITLEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQLDNGRTLADCN 60

Query: 130 IHREATLHLASKLVG 86
           I +E+TLHL  +L G
Sbjct: 61  IQKESTLHLVLRLQG 75


>ref|XP_004060383.1| PREDICTED: ubiquitin-60S ribosomal protein L40 isoform 11 [Gorilla
           gorilla gorilla]
          Length = 158

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/109 (51%), Positives = 78/109 (71%)
 Frame = -3

Query: 328 RDLSVRMQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDAL 149
           R L   MQ+FVK L GKT+TLEVEPSDT+++VK+ ++ K+GIP +QQ LIFAGK+L+D  
Sbjct: 25  RRLDANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 84

Query: 148 VVNDYDIHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2
            ++DY+I +E+TLHL  +L GG          +P L +LAQK+N  K+I
Sbjct: 85  TLSDYNIQKESTLHLVLRLRGG--------IIEPSLRQLAQKYNCDKMI 125