BLASTX nr result
ID: Cnidium21_contig00042333
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00042333 (336 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L... 113 2e-23 ref|XP_002328216.1| predicted protein [Populus trichocarpa] gi|2... 111 5e-23 ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group] g... 110 9e-23 ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60... 110 9e-23 ref|XP_004060383.1| PREDICTED: ubiquitin-60S ribosomal protein L... 109 2e-22 >ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium distachyon] Length = 218 Score = 113 bits (282), Expect = 2e-23 Identities = 56/107 (52%), Positives = 79/107 (73%) Frame = -3 Query: 322 LSVRMQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVV 143 L +MQ+FVK L GKT+TLEVE SDT+ +VK+ + K+GIP +QQ LIFAGK+L+D + Sbjct: 73 LRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTL 132 Query: 142 NDYDIHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2 DY+I +E+TLHL +L GG G Q+ +N +P L LAQK+N+ K++ Sbjct: 133 ADYNIQKESTLHLVLRLRGGSRG-QYPKNLEPNLRILAQKYNENKMV 178 Score = 89.4 bits (220), Expect = 3e-16 Identities = 42/73 (57%), Positives = 56/73 (76%) Frame = -3 Query: 310 MQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVVNDYD 131 MQ+FVK L GKT+TLEVE DT+ VK+ ++ K+GIP +QQ LIFAGK+LDD + DY+ Sbjct: 1 MQIFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60 Query: 130 IHREATLHLASKL 92 I +E+TLHL +L Sbjct: 61 IQKESTLHLVLRL 73 >ref|XP_002328216.1| predicted protein [Populus trichocarpa] gi|222837731|gb|EEE76096.1| predicted protein [Populus trichocarpa] Length = 127 Score = 111 bits (278), Expect = 5e-23 Identities = 58/103 (56%), Positives = 74/103 (71%) Frame = -3 Query: 310 MQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVVNDYD 131 MQ+FVK L GK +TLEVE S TV +VK+ ++ K+GIP QQ LIFAGK+L+D+ + YD Sbjct: 1 MQIFVKTLTGKAVTLEVESSYTVDNVKAKIQDKEGIPPEQQRLIFAGKQLEDSRTLASYD 60 Query: 130 IHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2 I +E+TLHL +L GGKG +P L ELA+KFNQYKLI Sbjct: 61 IQKESTLHLVLRLRGGKGAPS--MKIEPSLRELARKFNQYKLI 101 >ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group] gi|51535937|dbj|BAD38019.1| putative ubiquitin / ribosomal protein CEP52 [Oryza sativa Japonica Group] gi|113631570|dbj|BAF25251.1| Os09g0452700 [Oryza sativa Japonica Group] gi|125563958|gb|EAZ09338.1| hypothetical protein OsI_31610 [Oryza sativa Indica Group] gi|125605917|gb|EAZ44953.1| hypothetical protein OsJ_29596 [Oryza sativa Japonica Group] Length = 140 Score = 110 bits (276), Expect = 9e-23 Identities = 55/103 (53%), Positives = 77/103 (74%) Frame = -3 Query: 310 MQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVVNDYD 131 MQ+FVK L GKT+TLEVE SDT+ +VK+ ++ K+GIP +QQ LIFAGK+L+D + DY+ Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 130 IHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2 I +E+TLHL +L GG G + + +P L ELAQK+N+ KL+ Sbjct: 61 IQKESTLHLVLRLRGGSRG-GYPKGIEPNLRELAQKYNENKLV 102 >ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein L40-like [Brachypodium distachyon] Length = 213 Score = 110 bits (276), Expect = 9e-23 Identities = 56/107 (52%), Positives = 79/107 (73%) Frame = -3 Query: 322 LSVRMQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVV 143 L RM +FVK L GKT+TLEVE SDT+ +VK+ ++ K+GIP +QQ LIFAGK+LDD + Sbjct: 73 LQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTL 132 Query: 142 NDYDIHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2 DY+I +E+TLHL +L GG+G + R +P L++LA K+N+ K+I Sbjct: 133 ADYNIQKESTLHLVLRLRGGRG--CYPRRIEPTLLKLALKYNERKMI 177 Score = 85.5 bits (210), Expect = 4e-15 Identities = 41/75 (54%), Positives = 56/75 (74%) Frame = -3 Query: 310 MQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDALVVNDYD 131 MQ+FVK L GKT+TLEVE SD + +VK+ ++ K+GIP QQ LIFAGK+LD+ + D + Sbjct: 1 MQIFVKTLTGKTITLEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQLDNGRTLADCN 60 Query: 130 IHREATLHLASKLVG 86 I +E+TLHL +L G Sbjct: 61 IQKESTLHLVLRLQG 75 >ref|XP_004060383.1| PREDICTED: ubiquitin-60S ribosomal protein L40 isoform 11 [Gorilla gorilla gorilla] Length = 158 Score = 109 bits (273), Expect = 2e-22 Identities = 56/109 (51%), Positives = 78/109 (71%) Frame = -3 Query: 328 RDLSVRMQVFVKNLIGKTLTLEVEPSDTVQHVKSLVEHKDGIPVNQQCLIFAGKELDDAL 149 R L MQ+FVK L GKT+TLEVEPSDT+++VK+ ++ K+GIP +QQ LIFAGK+L+D Sbjct: 25 RRLDANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 84 Query: 148 VVNDYDIHREATLHLASKLVGGKGGTQHYRNTDPKLVELAQKFNQYKLI 2 ++DY+I +E+TLHL +L GG +P L +LAQK+N K+I Sbjct: 85 TLSDYNIQKESTLHLVLRLRGG--------IIEPSLRQLAQKYNCDKMI 125