BLASTX nr result

ID: Cnidium21_contig00042283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042283
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   112   2e-23
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   103   1e-20
ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208...    93   3e-17
ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, parti...    91   8e-17
ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, parti...    91   8e-17

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/92 (60%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
 Frame = +1

Query: 1   KEFGVSLGNGEAVQGAGECKNVLLQL-GELEIVEDFLLFGLGNSDIILGVQWLEKLGAVT 177
           +EFGVSLG+G+AV+G G C+ V L L G L +VEDFL  GLGNSD+ILGVQWLE LG V 
Sbjct: 523 EEFGVSLGDGQAVRGTGICRAVALYLDGGLVVVEDFLPLGLGNSDVILGVQWLETLGTVV 582

Query: 178 TNWKSQQMKFRVGQKTVVLQGDPSLIHSKISL 273
           +NWK+Q+M F++G     L GDP+L  SK+SL
Sbjct: 583 SNWKTQKMSFQLGGVPYTLTGDPTLARSKVSL 614


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/91 (52%), Positives = 67/91 (73%)
 Frame = +1

Query: 1   KEFGVSLGNGEAVQGAGECKNVLLQLGELEIVEDFLLFGLGNSDIILGVQWLEKLGAVTT 180
           + FGVSLG G    G GECK V L L  + ++ED+L   LGNSD+ILGVQWLEKLG + T
Sbjct: 460 RPFGVSLGTGAEAHGQGECKAVPLHLQGVCVMEDYLPLTLGNSDLILGVQWLEKLGTMVT 519

Query: 181 NWKSQQMKFRVGQKTVVLQGDPSLIHSKISL 273
           NWK+Q ++++ G +TV L+G+P+L  +++SL
Sbjct: 520 NWKTQTLQYKEGNETVTLRGNPALSRTEVSL 550


>ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208187 [Cucumis sativus]
          Length = 1969

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/89 (49%), Positives = 59/89 (66%)
 Frame = +1

Query: 7    FGVSLGNGEAVQGAGECKNVLLQLGELEIVEDFLLFGLGNSDIILGVQWLEKLGAVTTNW 186
            +G+ +G+G+AVQG G CK   + L  L IVEDFL   LGN D++LG+ WL K GA+T +W
Sbjct: 948  YGIIMGSGKAVQGKGMCKGATVGLPVLTIVEDFLPLELGNLDMVLGMMWLRKQGAMTVDW 1007

Query: 187  KSQQMKFRVGQKTVVLQGDPSLIHSKISL 273
            K   M F VG   +VL+GDP L   ++SL
Sbjct: 1008 KELAMTFVVGDSKIVLKGDPLLTRMEVSL 1036


>ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 564

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/89 (48%), Positives = 60/89 (67%)
 Frame = +1

Query: 7   FGVSLGNGEAVQGAGECKNVLLQLGELEIVEDFLLFGLGNSDIILGVQWLEKLGAVTTNW 186
           FGV++G+G   QG G C  + L+L E+ IV DFL   LG+ D+ILG+QWL   G +  +W
Sbjct: 276 FGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLAIELGSVDVILGMQWLNTTGTMKIHW 335

Query: 187 KSQQMKFRVGQKTVVLQGDPSLIHSKISL 273
            S  M FR+G+K  +L+GDPSLI ++ SL
Sbjct: 336 PSLTMTFRMGKKQFILKGDPSLIRAECSL 364


>ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 1049

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/89 (48%), Positives = 60/89 (67%)
 Frame = +1

Query: 7   FGVSLGNGEAVQGAGECKNVLLQLGELEIVEDFLLFGLGNSDIILGVQWLEKLGAVTTNW 186
           FGV++G+G   QG G C  + L+L E+ IV DFL   LG+ D+ILG+QWL   G +  +W
Sbjct: 411 FGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLAIELGSVDVILGMQWLNTTGTMKIHW 470

Query: 187 KSQQMKFRVGQKTVVLQGDPSLIHSKISL 273
            S  M FR+G+K  +L+GDPSLI ++ SL
Sbjct: 471 PSLTMTFRMGKKQFILKGDPSLIRAECSL 499


Top