BLASTX nr result

ID: Cnidium21_contig00042275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042275
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171396.1| PREDICTED: 50S ribosomal protein L9, chlorop...    99   3e-19
ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chlorop...    99   3e-19
ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|1...    97   1e-18
ref|XP_002875701.1| hypothetical protein ARALYDRAFT_484888 [Arab...    97   2e-18
emb|CBI17129.3| unnamed protein product [Vitis vinifera]               97   2e-18

>ref|XP_004171396.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Cucumis
           sativus]
          Length = 102

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 56/92 (60%), Positives = 61/92 (66%)
 Frame = +3

Query: 3   KIGKGKQIFGT*VNINLFFKGFPLYYWHLKYDSCCDIVTTQDLVDIIKAQLQRDIDKKIV 182
           K GKGKQIFGT                          VT QDLVDIIKAQLQRDIDK+IV
Sbjct: 37  KGGKGKQIFGT--------------------------VTAQDLVDIIKAQLQRDIDKRIV 70

Query: 183 TLPDIRETGEYVAEMKLHPEVSARVRLTVFGN 278
            LP+IRETGEYVAE+KLHPEV+ARVR+ VF N
Sbjct: 71  DLPEIRETGEYVAELKLHPEVTARVRVNVFAN 102


>ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Cucumis
           sativus]
          Length = 198

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 56/92 (60%), Positives = 61/92 (66%)
 Frame = +3

Query: 3   KIGKGKQIFGT*VNINLFFKGFPLYYWHLKYDSCCDIVTTQDLVDIIKAQLQRDIDKKIV 182
           K GKGKQIFGT                          VT QDLVDIIKAQLQRDIDK+IV
Sbjct: 133 KGGKGKQIFGT--------------------------VTAQDLVDIIKAQLQRDIDKRIV 166

Query: 183 TLPDIRETGEYVAEMKLHPEVSARVRLTVFGN 278
            LP+IRETGEYVAE+KLHPEV+ARVR+ VF N
Sbjct: 167 DLPEIRETGEYVAELKLHPEVTARVRVNVFAN 198


>ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|118488503|gb|ABK96065.1|
           unknown [Populus trichocarpa]
           gi|222873559|gb|EEF10690.1| predicted protein [Populus
           trichocarpa]
          Length = 198

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 52/92 (56%), Positives = 62/92 (67%)
 Frame = +3

Query: 3   KIGKGKQIFGT*VNINLFFKGFPLYYWHLKYDSCCDIVTTQDLVDIIKAQLQRDIDKKIV 182
           K GKG+QIFGT                          VT QDLVDIIKAQ+QRD+DK+IV
Sbjct: 133 KGGKGRQIFGT--------------------------VTAQDLVDIIKAQIQRDVDKRIV 166

Query: 183 TLPDIRETGEYVAEMKLHPEVSARVRLTVFGN 278
           +LPDIRETGEY+AE+KLHPEV+A+VRL V+ N
Sbjct: 167 SLPDIRETGEYIAELKLHPEVTAQVRLNVYAN 198


>ref|XP_002875701.1| hypothetical protein ARALYDRAFT_484888 [Arabidopsis lyrata subsp.
           lyrata] gi|297321539|gb|EFH51960.1| hypothetical protein
           ARALYDRAFT_484888 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/92 (56%), Positives = 62/92 (67%)
 Frame = +3

Query: 3   KIGKGKQIFGT*VNINLFFKGFPLYYWHLKYDSCCDIVTTQDLVDIIKAQLQRDIDKKIV 182
           K GKGKQIFG+                          VT QDLVDIIKAQLQRDIDK++V
Sbjct: 132 KGGKGKQIFGS--------------------------VTAQDLVDIIKAQLQRDIDKRLV 165

Query: 183 TLPDIRETGEYVAEMKLHPEVSARVRLTVFGN 278
           +LP+IRETGEY+AE+KLHP+V+ARVR+ VF N
Sbjct: 166 SLPEIRETGEYIAELKLHPDVTARVRINVFAN 197


>emb|CBI17129.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/92 (57%), Positives = 61/92 (66%)
 Frame = +3

Query: 3   KIGKGKQIFGT*VNINLFFKGFPLYYWHLKYDSCCDIVTTQDLVDIIKAQLQRDIDKKIV 182
           K GKGKQIFG+                          VT QDL DIIKAQLQRD+DK+IV
Sbjct: 97  KGGKGKQIFGS--------------------------VTAQDLTDIIKAQLQRDVDKRIV 130

Query: 183 TLPDIRETGEYVAEMKLHPEVSARVRLTVFGN 278
           +LP+IRETGEYVAE+KLHPEV+ARVRL V+ N
Sbjct: 131 SLPEIRETGEYVAELKLHPEVTARVRLNVYAN 162