BLASTX nr result

ID: Cnidium21_contig00042272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042272
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]    75   4e-12
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]    72   5e-11
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...    70   1e-10
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]    70   2e-10
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]    69   3e-10

>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 51/130 (39%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
 Frame = -2

Query: 383 ILLTSSLKMPVVLGKLHRGLYLFSHDLTKTANHSPPAVT-SISTNSCNSTDSFHNV*STC 207
           IL   + +  + LG+   GLY     L   A+  P   T S +T SC S  S        
Sbjct: 197 ILQDLTTRTTIGLGEQRDGLYY----LVALASEKPKTQTPSAATTSCRSPSS------QV 246

Query: 206 NVSTSVWHSRLGHLPLYKLKNIA--LCKDNDVTLLSCDICAKARKHKLPFPHSSIHSSQP 33
             ST++WH RLGHL   +L  +A  L   +  +  +CD+CA A++ +LPF  SSI S +P
Sbjct: 247 TSSTALWHRRLGHLSSSRLDFMAKHLLNFHFQSNNACDVCALAKQRQLPFSVSSISSVRP 306

Query: 32  FELIHVDIWG 3
           FELIH DIWG
Sbjct: 307 FELIHCDIWG 316


>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
 Frame = -2

Query: 383 ILLTSSLKMPVVLGKLHRGLYLFSHDLTKTANHSPPAVT-SISTNSCNSTDSFHNV*STC 207
           IL   + +  + LG+   GLY     L   A+  P   T S +  SC S  S        
Sbjct: 415 ILQDLTTRTTIGLGEQRDGLYY----LVALASEKPKNQTPSAAATSCRSPSS------QV 464

Query: 206 NVSTSVWHSRLGHLPLYKLKNIA--LCKDNDVTLLSCDICAKARKHKLPFPHSSIHSSQP 33
             ST++WH RLGHL   +L  +A  L      +  +CD+CA A++ +LPF  SSI S +P
Sbjct: 465 TSSTALWHHRLGHLSSSRLDFMAKHLLNFPFQSNNACDVCALAKQRRLPFSVSSISSIRP 524

Query: 32  FELIHVDIWG 3
           FELIH DIWG
Sbjct: 525 FELIHCDIWG 534


>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = -2

Query: 197 TSVWHSRLGHLPLYKLKNIA---LCKDNDVTLLSCDICAKARKHKLPFPHSSIHSSQPFE 27
           + +WH RLGHLP + +K I    +  DN  T   CDIC  AR+ K PFP S+I S Q FE
Sbjct: 13  SKLWHFRLGHLPFHAMKTIKTLPVTVDNKQTF-PCDICPMARQSKPPFPSSTIKSKQCFE 71

Query: 26  LIHVDIWG 3
           LIH+D WG
Sbjct: 72  LIHIDTWG 79


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
 Frame = -2

Query: 383 ILLTSSLKMPVVLGKLHRGLYLFSH---DLTKTANHSPPAVTSISTNSCNSTDSFHNV*S 213
           +L   + +  + LGK   GLY  +    + T+T ++S P        +CN T S      
Sbjct: 494 VLQDLATRRMIGLGKQRDGLYYLAALTTNKTETNSYSSPN----RPPTCNLTTS------ 543

Query: 212 TCNVSTSVWHSRLGHLPLYKLK-------NIALCKDNDVTLLSCDICAKARKHKLPFPHS 54
               ST +WHSRLGH+   +L        N ++  +ND     C IC  A++H+LPF  S
Sbjct: 544 ----STDLWHSRLGHVSHSRLSFIAKNFLNFSIQFNND-----CPICLLAKQHRLPFGTS 594

Query: 53  SIHSSQPFELIHVDIWG 3
            I S +PF+LIH DIWG
Sbjct: 595 EISSEKPFDLIHCDIWG 611


>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
          Length = 1236

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 49/130 (37%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
 Frame = -2

Query: 383 ILLTSSLKMPVVLGKLHRGLYLFSHDLTKTANHSPPAVT-SISTNSCNSTDSFHNV*STC 207
           IL   + +  + LG+   GLY     L   A+  P   T S +  SC S  S        
Sbjct: 444 ILQDLTTRTTIGLGEQRDGLYY----LVALASKKPKTQTPSAAATSCRSPSS------QV 493

Query: 206 NVSTSVWHSRLGHLPLYKLKNIA--LCKDNDVTLLSCDICAKARKHKLPFPHSSIHSSQP 33
             ST++WH  LGHL   +L  +A  L      +  +CD+CA A++ +LPF  SSI S +P
Sbjct: 494 TSSTALWHRCLGHLSSSRLDFMAKHLLNFPFQSNNACDVCALAKQRRLPFSVSSISSVRP 553

Query: 32  FELIHVDIWG 3
           FELIH DIWG
Sbjct: 554 FELIHCDIWG 563


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