BLASTX nr result

ID: Cnidium21_contig00042260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042260
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61550.1| hypothetical protein OsJ_15885 [Oryza sativa Japo...   144   1e-32
gb|AEH25587.1| transposase [Solanum demissum]                         140   1e-31
ref|NP_001173400.1| Os03g0317200 [Oryza sativa Japonica Group] g...   139   4e-31
gb|ABA98502.1| transposon protein, putative, Mutator sub-class [...   137   1e-30
gb|EEE58950.1| hypothetical protein OsJ_10628 [Oryza sativa Japo...   129   3e-28

>gb|EEE61550.1| hypothetical protein OsJ_15885 [Oryza sativa Japonica Group]
          Length = 935

 Score =  144 bits (363), Expect = 1e-32
 Identities = 73/189 (38%), Positives = 107/189 (56%), Gaps = 6/189 (3%)
 Frame = -2

Query: 565  STESWEWFITLLKDDLNLDNGFGYTLMTDQHKGLKNAIDNILPGAEHRCCARHIHANWKK 386
            + +SW+WF +LL  DL + +G G+  ++DQ KG+ NA+ +  P  EHR CARHI+ANWKK
Sbjct: 496  NNDSWDWFCSLLFRDLKVGSGEGWVFISDQQKGILNAVHHWAPLVEHRNCARHIYANWKK 555

Query: 385  NHPGNV------LKNMF*QAAKANTIEARYKPILELLDDIRLKVMERLHVKRDLMMNNDC 224
                        + N   ++     ++ARY PI+ +L+ IR KVM R+   RD     + 
Sbjct: 556  KFRNKEWQKKFGVDNNMCESFNKWIVQARYLPIISMLEAIRCKVMVRIQENRDKAAKWNT 615

Query: 223  RICPQIIKKLNFSIKASKFCKSTWTGADECEVKDIDGGQWVVNMVQRTCSCRRWELRGYP 44
             ICP I K+L   I  S FC   + G D  EVK     ++ VN+  +TCSCR W+L G P
Sbjct: 616  LICPNIYKRLKSYITESAFCHPIYNGDDSFEVK-TQTSRFTVNLSTKTCSCRYWQLSGLP 674

Query: 43   CSHGCTALF 17
            C+H  + ++
Sbjct: 675  CAHAISCIY 683


>gb|AEH25587.1| transposase [Solanum demissum]
          Length = 1124

 Score =  140 bits (354), Expect = 1e-31
 Identities = 78/187 (41%), Positives = 105/187 (56%), Gaps = 6/187 (3%)
 Frame = -2

Query: 559  ESWEWFITLLKDDLNLDNGFGYTLMTDQHKGLKNAIDNILPGAEHRCCARHIHANWKKNH 380
            E+W WFI LLK+DL L +G   TL+TD  KGL   I NILP AEHR CARHI ANW K+ 
Sbjct: 608  ETWTWFIKLLKEDLGLGDGEDLTLITDMQKGLIGVILNILPLAEHRMCARHILANWAKDW 667

Query: 379  PGNVLKNMF*QAAKANTIEARYKPILELLDDIRLKVMERLHVKRDLMMNNDCRICPQIIK 200
              N +   F     +  + AR+K I+ +LD+IR+K+M R+   R+      C   P  +K
Sbjct: 668  RDNNMSECF----NSWILAARHKTIITMLDEIRVKMMTRIANLREFTNTWMCDFSPMSLK 723

Query: 199  KLNFSIKASKFCKSTWTGADECEVKD------IDGGQWVVNMVQRTCSCRRWELRGYPCS 38
             L  +I  S  C   + G D  EVK+      +D G+W       TCSCR W+L+G PC+
Sbjct: 724  VLQENINRSMNCNIEFNGVDGFEVKEGPFQHSVDLGRW-------TCSCRVWQLKGIPCA 776

Query: 37   HGCTALF 17
            H   A++
Sbjct: 777  HAVAAIY 783


>ref|NP_001173400.1| Os03g0317200 [Oryza sativa Japonica Group]
            gi|108707832|gb|ABF95627.1| transposon protein, putative,
            Mutator sub-class [Oryza sativa Japonica Group]
            gi|255674462|dbj|BAH92128.1| Os03g0317200 [Oryza sativa
            Japonica Group]
          Length = 787

 Score =  139 bits (349), Expect = 4e-31
 Identities = 78/191 (40%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
 Frame = -2

Query: 565  STESWEWFITLLKDDLNLDNGFGYTLMTDQHKGLKNAIDNILPGAEHRCCARHIHANWKK 386
            + +SW+WF  LL  DL   +G G+ +++DQ KG+ NAI+  +P AEHR CARHI+ANW+K
Sbjct: 521  TNDSWDWFCALLFKDLVAGDGDGWVVISDQQKGIINAIETWIPKAEHRNCARHIYANWRK 580

Query: 385  NHPGNVLKNMF*QAAKANTIEARYKPILELLDDIRLKVMERLHVKRDLMMNNDCRICPQI 206
                   KN             R+ PI+ +L+ IR KVM R+H  R  M      ICP I
Sbjct: 581  K-----FKN-------------RFLPIISMLEAIRRKVMVRIHEHRTKMEKWIGPICPNI 622

Query: 205  IKKLNFSIKASKFCKSTWTGADECEVKDIDGGQWVVNMVQRTCSCRRWELRGYPCSHGCT 26
            +KKLN  +  S FC +   G D+ EVK  +  ++ VN+  RTCSCR W+L G  C H   
Sbjct: 623  LKKLNAYVTESGFCHAISNGNDKFEVKHHE-QRFTVNLQSRTCSCRYWQLAGLSCCHAIA 681

Query: 25   ALF----SIDD 5
             +     S+DD
Sbjct: 682  CIHYKTNSLDD 692


>gb|ABA98502.1| transposon protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 760

 Score =  137 bits (345), Expect = 1e-30
 Identities = 72/182 (39%), Positives = 102/182 (56%)
 Frame = -2

Query: 565 STESWEWFITLLKDDLNLDNGFGYTLMTDQHKGLKNAIDNILPGAEHRCCARHIHANWKK 386
           + +SW+WF  LL  DL   +G G+ +++DQ KG+ NA++  +P AEHR CARHI+ANW+K
Sbjct: 468 TNDSWDWFCALLFKDLVAGDGDGWVVISDQQKGIINAVETWIPKAEHRNCARHIYANWRK 527

Query: 385 NHPGNVLKNMF*QAAKANTIEARYKPILELLDDIRLKVMERLHVKRDLMMNNDCRICPQI 206
                  +  F           R+ PI+ +L+ IR KVM R+H  R  M      ICP I
Sbjct: 528 KFKNREWQKKF----------WRFLPIISMLEAIRRKVMVRIHEHRTKMEKWIGPICPNI 577

Query: 205 IKKLNFSIKASKFCKSTWTGADECEVKDIDGGQWVVNMVQRTCSCRRWELRGYPCSHGCT 26
           +KKLN  +    FC +   G D+ EVK  +  ++ VN+  RTCSCR W+L   PC H   
Sbjct: 578 LKKLNAYVTEYGFCHAISNGNDKFEVKHHE-QRFTVNLQSRTCSCRYWQLAELPCCHAIA 636

Query: 25  AL 20
            +
Sbjct: 637 CI 638


>gb|EEE58950.1| hypothetical protein OsJ_10628 [Oryza sativa Japonica Group]
          Length = 781

 Score =  129 bits (324), Expect = 3e-28
 Identities = 75/191 (39%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
 Frame = -2

Query: 565  STESWEWFITLLKDDLNLDNGFGYTLMTDQHKGLKNAIDNILPGAEHRCCARHIHANWKK 386
            + +SW+WF  LL  DL   +G G+ +++DQ KG+ NAI+  +P AEHR CARHI+ANW+K
Sbjct: 521  TNDSWDWFCALLFKDLVAGDGDGWVVISDQQKGIINAIETWIPKAEHRNCARHIYANWRK 580

Query: 385  NHPGNVLKNMF*QAAKANTIEARYKPILELLDDIRLKVMERLHVKRDLMMNNDCRICPQI 206
                   KN                    +L+ IR KVM R+H  R  M      ICP I
Sbjct: 581  K-----FKN-------------------SMLEAIRRKVMVRIHEHRTKMEKWIGPICPNI 616

Query: 205  IKKLNFSIKASKFCKSTWTGADECEVKDIDGGQWVVNMVQRTCSCRRWELRGYPCSHGCT 26
            +KKLN  +  S FC +   G D+ EVK  +  ++ VN+  RTCSCR W+L G  C H   
Sbjct: 617  LKKLNAYVTESGFCHAISNGNDKFEVKHHE-QRFTVNLQSRTCSCRYWQLAGLSCCHAIA 675

Query: 25   ALF----SIDD 5
             +     S+DD
Sbjct: 676  CIHYKTNSLDD 686


Top