BLASTX nr result

ID: Cnidium21_contig00042227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042227
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA98208.1| unnamed protein product [Arabidopsis thaliana]         75   6e-12
ref|NP_198371.3| DNA binding and zinc-finger domain-containing p...    75   6e-12
ref|NP_851094.2| DNA binding and zinc-finger domain-containing p...    75   6e-12
ref|XP_002875697.1| hypothetical protein ARALYDRAFT_905616 [Arab...    72   4e-11
ref|XP_002271257.2| PREDICTED: uncharacterized protein LOC100243...    70   2e-10

>dbj|BAA98208.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1515

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 18/121 (14%)
 Frame = -2

Query: 319 KDVEGTGVLLGKVVECDKGEYRVIYHDGDCEYMGHRKVRQILIRDSDFDKTLRVKRKKLD 140
           KD +   V LGK+V  D G YRVIY DGDCE +    +R+++I DS  D  LRV+RKKLD
Sbjct: 51  KDFDDNEVFLGKIVSYDTGLYRVIYEDGDCEELESGDLRRLIISDSYLDDELRVRRKKLD 110

Query: 139 ELILKK-------YANDSNVKLGNAVAG-----------SKSLSQSVSSNFGTSRYKNIG 14
           +LILKK          +  V+L N V G             S S S SS  G  R  ++ 
Sbjct: 111 KLILKKEEKKKRNSPENKAVELPNQVNGVQARAVTNSEDGDSYSDSESSESGDKRGSDLE 170

Query: 13  V 11
           +
Sbjct: 171 I 171


>ref|NP_198371.3| DNA binding and zinc-finger domain-containing protein [Arabidopsis
           thaliana] gi|332006563|gb|AED93946.1| DNA binding and
           zinc-finger domain-containing protein [Arabidopsis
           thaliana]
          Length = 1539

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 18/121 (14%)
 Frame = -2

Query: 319 KDVEGTGVLLGKVVECDKGEYRVIYHDGDCEYMGHRKVRQILIRDSDFDKTLRVKRKKLD 140
           KD +   V LGK+V  D G YRVIY DGDCE +    +R+++I DS  D  LRV+RKKLD
Sbjct: 51  KDFDDNEVFLGKIVSYDTGLYRVIYEDGDCEELESGDLRRLIISDSYLDDELRVRRKKLD 110

Query: 139 ELILKK-------YANDSNVKLGNAVAG-----------SKSLSQSVSSNFGTSRYKNIG 14
           +LILKK          +  V+L N V G             S S S SS  G  R  ++ 
Sbjct: 111 KLILKKEEKKKRNSPENKAVELPNQVNGVQARAVTNSEDGDSYSDSESSESGDKRGSDLE 170

Query: 13  V 11
           +
Sbjct: 171 I 171


>ref|NP_851094.2| DNA binding and zinc-finger domain-containing protein [Arabidopsis
           thaliana] gi|332006562|gb|AED93945.1| DNA binding and
           zinc-finger domain-containing protein [Arabidopsis
           thaliana]
          Length = 1706

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 18/121 (14%)
 Frame = -2

Query: 319 KDVEGTGVLLGKVVECDKGEYRVIYHDGDCEYMGHRKVRQILIRDSDFDKTLRVKRKKLD 140
           KD +   V LGK+V  D G YRVIY DGDCE +    +R+++I DS  D  LRV+RKKLD
Sbjct: 51  KDFDDNEVFLGKIVSYDTGLYRVIYEDGDCEELESGDLRRLIISDSYLDDELRVRRKKLD 110

Query: 139 ELILKK-------YANDSNVKLGNAVAG-----------SKSLSQSVSSNFGTSRYKNIG 14
           +LILKK          +  V+L N V G             S S S SS  G  R  ++ 
Sbjct: 111 KLILKKEEKKKRNSPENKAVELPNQVNGVQARAVTNSEDGDSYSDSESSESGDKRGSDLE 170

Query: 13  V 11
           +
Sbjct: 171 I 171


>ref|XP_002875697.1| hypothetical protein ARALYDRAFT_905616 [Arabidopsis lyrata subsp.
           lyrata] gi|297321535|gb|EFH51956.1| hypothetical protein
           ARALYDRAFT_905616 [Arabidopsis lyrata subsp. lyrata]
          Length = 1570

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
 Frame = -2

Query: 319 KDVEGTGVLLGKVVECDKGEYRVIYHDGDCEYMGHRKVRQILIRDSDFDKTLRVKRKKLD 140
           KD +  GV LGK+V  D G Y V+Y DGD E +    +R+++I DS  D  LRV+R KLD
Sbjct: 51  KDFDDNGVFLGKIVSYDTGLYSVVYEDGDSEELESGDLRRLIIADSYLDNELRVRRNKLD 110

Query: 139 ELILKKYANDSN------VKLGNAVAGSKSLSQSVSSN 44
           +LILK+     N      V+L N V G K+ + + S++
Sbjct: 111 KLILKEEKKKRNSPENKVVELPNQVNGEKAPAVTKSNS 148


>ref|XP_002271257.2| PREDICTED: uncharacterized protein LOC100243147 [Vitis vinifera]
          Length = 1582

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/92 (42%), Positives = 57/92 (61%)
 Frame = -2

Query: 319 KDVEGTGVLLGKVVECDKGEYRVIYHDGDCEYMGHRKVRQILIRDSDFDKTLRVKRKKLD 140
           K+ EG G+ LGK++  D G YRV Y DGDCE +   ++   ++ D+ FD  L  +RKKLD
Sbjct: 48  KEFEGNGIFLGKIMYYDGGLYRVDYEDGDCEDLESSELCSFIMEDAYFDDDLTERRKKLD 107

Query: 139 ELILKKYANDSNVKLGNAVAGSKSLSQSVSSN 44
           ELILK+  N S +KL  +  G + +  S+ S+
Sbjct: 108 ELILKR-KNISAMKLVESGNGVERVEASLVSD 138


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