BLASTX nr result

ID: Cnidium21_contig00042211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042211
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313794.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002868895.1| DNA binding protein [Arabidopsis lyrata subs...   131   7e-29
ref|XP_002305430.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
emb|CBI32595.3| unnamed protein product [Vitis vinifera]              130   2e-28
ref|XP_003631660.1| PREDICTED: dnaJ homolog subfamily C member 2...   130   2e-28

>ref|XP_002313794.1| predicted protein [Populus trichocarpa] gi|222850202|gb|EEE87749.1|
           predicted protein [Populus trichocarpa]
          Length = 87

 Score =  134 bits (338), Expect = 8e-30
 Identities = 64/83 (77%), Positives = 75/83 (90%), Gaps = 2/83 (2%)
 Frame = +3

Query: 117 ASMSSHGS--WTVKQNKAFEKALAVYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVADI 290
           +SMSS GS  WTV+QNKAFE+ALAVYD+DTPDRWYNVA+AVGGKTAEEVKRHYE+LV D+
Sbjct: 4   SSMSSRGSGSWTVQQNKAFERALAVYDRDTPDRWYNVARAVGGKTAEEVKRHYELLVEDV 63

Query: 291 RRIENGNVPFPNYRTTGG**NAR 359
           + IE+G+VPFPNYRTTG   +AR
Sbjct: 64  KHIESGHVPFPNYRTTGANGHAR 86


>ref|XP_002868895.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314731|gb|EFH45154.1| DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 100

 Score =  131 bits (330), Expect = 7e-29
 Identities = 63/86 (73%), Positives = 71/86 (82%), Gaps = 2/86 (2%)
 Frame = +3

Query: 117 ASMSSH--GSWTVKQNKAFEKALAVYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVADI 290
           +SMSSH  GSWT KQNKAFE+ALA YD+DTP+RW NVAK VGGKT EEVKRHYE+LV DI
Sbjct: 4   SSMSSHSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 291 RRIENGNVPFPNYRTTGG**NARCGE 368
             IENG+VPFPNYRT+GG  N R  +
Sbjct: 64  NNIENGHVPFPNYRTSGGCTNGRLSQ 89


>ref|XP_002305430.1| predicted protein [Populus trichocarpa] gi|222848394|gb|EEE85941.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score =  131 bits (330), Expect = 7e-29
 Identities = 60/83 (72%), Positives = 71/83 (85%)
 Frame = +3

Query: 120 SMSSHGSWTVKQNKAFEKALAVYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVADIRRI 299
           S    GSWT +QNKAFE+ALAVYD+DTPDRW+NVA+AVGGKTAEEVKRHYEILV D++ I
Sbjct: 7   SSRGSGSWTAQQNKAFERALAVYDRDTPDRWHNVARAVGGKTAEEVKRHYEILVEDVKHI 66

Query: 300 ENGNVPFPNYRTTGG**NARCGE 368
           E+G VPFPNYRTTG   +++ GE
Sbjct: 67  ESGRVPFPNYRTTGANGHSKTGE 89


>emb|CBI32595.3| unnamed protein product [Vitis vinifera]
          Length = 111

 Score =  130 bits (326), Expect = 2e-28
 Identities = 60/76 (78%), Positives = 67/76 (88%)
 Frame = +3

Query: 114 MASMSSHGSWTVKQNKAFEKALAVYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVADIR 293
           M+S SS  SWT KQNKAFE+ALAVYDKDTPDRWYNVA+AVGGKT EEVKRHYEILV DI+
Sbjct: 16  MSSRSSGSSWTAKQNKAFEEALAVYDKDTPDRWYNVARAVGGKTVEEVKRHYEILVEDIK 75

Query: 294 RIENGNVPFPNYRTTG 341
            I++  VPFPNY+TTG
Sbjct: 76  SIDSDKVPFPNYKTTG 91


>ref|XP_003631660.1| PREDICTED: dnaJ homolog subfamily C member 2-like [Vitis vinifera]
          Length = 101

 Score =  130 bits (326), Expect = 2e-28
 Identities = 60/76 (78%), Positives = 67/76 (88%)
 Frame = +3

Query: 114 MASMSSHGSWTVKQNKAFEKALAVYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVADIR 293
           M+S SS  SWT KQNKAFE+ALAVYDKDTPDRWYNVA+AVGGKT EEVKRHYEILV DI+
Sbjct: 6   MSSRSSGSSWTAKQNKAFEEALAVYDKDTPDRWYNVARAVGGKTVEEVKRHYEILVEDIK 65

Query: 294 RIENGNVPFPNYRTTG 341
            I++  VPFPNY+TTG
Sbjct: 66  SIDSDKVPFPNYKTTG 81


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