BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042190
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   268   3e-70
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   266   1e-69
emb|CBI31329.3| unnamed protein product [Vitis vinifera]              264   6e-69
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   264   6e-69
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...   263   8e-69

>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  268 bits (685), Expect = 3e-70
 Identities = 127/170 (74%), Positives = 148/170 (87%)
 Frame = -3

Query: 512 LDQTEEAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLL 333
           +D++EEA FLFREM+LSG EPN VTIAS+LPLCARV N+QHG+EFHCY+++R GF+DYLL
Sbjct: 409 MDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLL 468

Query: 332 LWNALVDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQ 153
           LWN+LVDMYARSGK+  AKRLFD +S++DEVTYTSLIAGYGIQGEG+ A+KLF+EM    
Sbjct: 469 LWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRH 528

Query: 152 IRPDHVTRIAVLSACSHSGLVIEGQMLFEKMSRVYGITPRLEHFACMVDL 3
           I+PDHVT +AVLSACSHSGLV EG  LFE M   YGI PRLEHFACMVDL
Sbjct: 529 IKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDL 578



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/152 (30%), Positives = 79/152 (51%)
 Frame = -3

Query: 497 EAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLLLWNAL 318
           EA   +++M   G  P+  T  S+L  C   ++I  G++ H   I        L + N+L
Sbjct: 177 EALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHA-SINASCLGWNLFVHNSL 235

Query: 317 VDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQIRPDH 138
           V MYA++G++  A+ LF+ + ++D+V++ ++I+GY  +G  K A +LF +M    I  + 
Sbjct: 236 VSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNI 295

Query: 137 VTRIAVLSACSHSGLVIEGQMLFEKMSRVYGI 42
           +T   +   C  SG   E   L   M R YGI
Sbjct: 296 ITWNTIAGGCVQSGNFEEALELLSHM-RSYGI 326



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 48/166 (28%), Positives = 79/166 (47%)
 Frame = -3

Query: 500 EEAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLLLWNA 321
           EEA  L   M   G + ++V     L  C+ +  I+ GRE H   I R  ++    + NA
Sbjct: 312 EEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAI-RSFYDGVDNVKNA 370

Query: 320 LVDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQIRPD 141
           L+ MY+R   +  A  LF     K+ +T+ S+++GY      + A  LF EM+ S I P+
Sbjct: 371 LITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPN 430

Query: 140 HVTRIAVLSACSHSGLVIEGQMLFEKMSRVYGITPRLEHFACMVDL 3
           +VT  ++L  C+    +  G+     + R  G    L  +  +VD+
Sbjct: 431 YVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDM 476


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  266 bits (680), Expect = 1e-69
 Identities = 123/170 (72%), Positives = 151/170 (88%)
 Frame = -3

Query: 512 LDQTEEAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLL 333
           +D++EEA FL REM+LSG EPN VTIAS+LPLCARV N+QHG+EFHCYM +RE F+D+LL
Sbjct: 490 MDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLL 549

Query: 332 LWNALVDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQ 153
           LWNALVDMYARSGK+  A+R+FD+L ++D++TYTS+IAGYG+QGEG+AA+KLFEEM   Q
Sbjct: 550 LWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQ 609

Query: 152 IRPDHVTRIAVLSACSHSGLVIEGQMLFEKMSRVYGITPRLEHFACMVDL 3
           I+PDH+T IAVLSACSHSGLV +GQ+LFEKM  +YG+TP LEHFACM DL
Sbjct: 610 IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDL 659



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/117 (31%), Positives = 65/117 (55%)
 Frame = -3

Query: 500 EEAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLLLWNA 321
           ++A   +++M+  G  P+N T  S+L  C   +++  G+E H   I     +  L++ NA
Sbjct: 257 QKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVH-ESINASRIKWSLIVHNA 315

Query: 320 LVDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQI 150
           L+ MY + GK+ +A+ LFD + ++D V++ S+I+ Y   G    A +LF  M A  I
Sbjct: 316 LISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDI 372


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  264 bits (674), Expect = 6e-69
 Identities = 122/170 (71%), Positives = 150/170 (88%)
 Frame = -3

Query: 512 LDQTEEAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLL 333
           +D++EEA FL REM+L G EPN VTIAS+LPLCARV N+QHG+EFHCYM +RE F+D+LL
Sbjct: 371 MDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLL 430

Query: 332 LWNALVDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQ 153
           LWNALVDMYARSGK+  A+R+FD+L ++D++TYTS+IAGYG+QGEG+AA+KLFEEM   Q
Sbjct: 431 LWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQ 490

Query: 152 IRPDHVTRIAVLSACSHSGLVIEGQMLFEKMSRVYGITPRLEHFACMVDL 3
           I+PDH+T IAVLSACSHSGLV +GQ+LFEKM  +YG+TP LEHFACM DL
Sbjct: 491 IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDL 540



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 45/164 (27%), Positives = 77/164 (46%)
 Frame = -3

Query: 494 AFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLLLWNALV 315
           A  L  +M   G   ++V +   L  C+ + + + G+E H + I R  F +   + NAL+
Sbjct: 276 ALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAI-RSCFGEVDTVKNALI 334

Query: 314 DMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQIRPDHV 135
            MY+R   +  A  LF L+  K  +T+ S+I+G       + A  L  EM+   I P++V
Sbjct: 335 TMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYV 394

Query: 134 TRIAVLSACSHSGLVIEGQMLFEKMSRVYGITPRLEHFACMVDL 3
           T  +VL  C+    +  G+     M+R       L  +  +VD+
Sbjct: 395 TIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDM 438


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  264 bits (674), Expect = 6e-69
 Identities = 122/170 (71%), Positives = 150/170 (88%)
 Frame = -3

Query: 512 LDQTEEAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLL 333
           +D++EEA FL REM+L G EPN VTIAS+LPLCARV N+QHG+EFHCYM +RE F+D+LL
Sbjct: 416 MDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLL 475

Query: 332 LWNALVDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQ 153
           LWNALVDMYARSGK+  A+R+FD+L ++D++TYTS+IAGYG+QGEG+AA+KLFEEM   Q
Sbjct: 476 LWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQ 535

Query: 152 IRPDHVTRIAVLSACSHSGLVIEGQMLFEKMSRVYGITPRLEHFACMVDL 3
           I+PDH+T IAVLSACSHSGLV +GQ+LFEKM  +YG+TP LEHFACM DL
Sbjct: 536 IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDL 585



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/117 (31%), Positives = 65/117 (55%)
 Frame = -3

Query: 500 EEAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLLLWNA 321
           ++A   +++M+  G  P+N T  S+L  C   +++  G+E H   I     +  L++ NA
Sbjct: 183 QKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVH-ESINASRIKWSLIVHNA 241

Query: 320 LVDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQI 150
           L+ MY + GK+ +A+ LFD + ++D V++ S+I+ Y   G    A +LF  M A  I
Sbjct: 242 LISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDI 298



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 45/164 (27%), Positives = 77/164 (46%)
 Frame = -3

Query: 494 AFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLLLWNALV 315
           A  L  +M   G   ++V +   L  C+ + + + G+E H + I R  F +   + NAL+
Sbjct: 321 ALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAI-RSCFGEVDTVKNALI 379

Query: 314 DMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQIRPDHV 135
            MY+R   +  A  LF L+  K  +T+ S+I+G       + A  L  EM+   I P++V
Sbjct: 380 TMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYV 439

Query: 134 TRIAVLSACSHSGLVIEGQMLFEKMSRVYGITPRLEHFACMVDL 3
           T  +VL  C+    +  G+     M+R       L  +  +VD+
Sbjct: 440 TIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDM 483


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  263 bits (673), Expect = 8e-69
 Identities = 123/170 (72%), Positives = 149/170 (87%)
 Frame = -3

Query: 512 LDQTEEAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLL 333
           +D++EEA FLFREM+ SG EPN VTIAS+LP CARV N+Q G+EFHCY+++REGFEDYLL
Sbjct: 358 MDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLL 417

Query: 332 LWNALVDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQ 153
           LWN+LV+MYARSGK+  AKR+FD L ++D+VTYTSLIAGYGIQGEGK A+KLF+EMI  +
Sbjct: 418 LWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHR 477

Query: 152 IRPDHVTRIAVLSACSHSGLVIEGQMLFEKMSRVYGITPRLEHFACMVDL 3
           I+PD VT +AVLSACSHSGLV EG +LFEKMS +YGI P +EHF+CMVDL
Sbjct: 478 IKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDL 527



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/130 (32%), Positives = 70/130 (53%)
 Frame = -3

Query: 497 EAFFLFREMILSGFEPNNVTIASLLPLCARVVNIQHGREFHCYMIKREGFEDYLLLWNAL 318
           EA   +REM+  G  P+N T  S+L  C   +++  GRE H  +    G    L + N+L
Sbjct: 125 EALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSL 184

Query: 317 VDMYARSGKIFLAKRLFDLLSKKDEVTYTSLIAGYGIQGEGKAAVKLFEEMIASQIRPDH 138
           V MY + G++  A+RLF+ + ++D V++  +I+ Y  +G  K A +LFEEM  +    + 
Sbjct: 185 VSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNI 244

Query: 137 VTRIAVLSAC 108
           +T   +   C
Sbjct: 245 ITWNTIAGGC 254



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 35/176 (19%)
 Frame = -3

Query: 500 EEAFFLFREMILSGFEPNNVT---------------------------------IASLLP 420
           +EAF LF EM L+G E N +T                                 +A ++ 
Sbjct: 226 KEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIG 285

Query: 419 L--CARVVNIQHGREFHCYMIKREGFEDYLLLWNALVDMYARSGKIFLAKRLFDLLSKKD 246
           L  C+ +  I+ G   H   I R  F+ +  + NAL+ MY+R   +  A  LF  +  K 
Sbjct: 286 LGACSHIGAIKLGTVIHASAI-RSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKS 344

Query: 245 EVTYTSLIAGYGIQGEGKAAVKLFEEMIASQIRPDHVTRIAVLSACSHSGLVIEGQ 78
             T+ S+++GY      + A  LF EM+ S I P++VT  ++L  C+    + +G+
Sbjct: 345 LTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGK 400