BLASTX nr result

ID: Cnidium21_contig00042140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042140
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309099.1| copper transporter [Populus trichocarpa] gi|...   139   6e-31
ref|XP_002273204.1| PREDICTED: copper transporter 6 [Vitis vinif...   133   3e-29
ref|XP_004147932.1| PREDICTED: copper transporter 6-like [Cucumi...   129   6e-28
gb|AFK47015.1| unknown [Medicago truncatula]                          123   3e-26
ref|XP_003516909.1| PREDICTED: copper transporter 6-like isoform...   122   5e-26

>ref|XP_002309099.1| copper transporter [Populus trichocarpa]
           gi|222855075|gb|EEE92622.1| copper transporter [Populus
           trichocarpa]
          Length = 148

 Score =  139 bits (349), Expect = 6e-31
 Identities = 68/118 (57%), Positives = 86/118 (72%)
 Frame = +2

Query: 74  MPMSPPVSTEMAMQMNFYWGKDVIILFQGWPSNNLAMYILALAFVFMLSAATEVMSIPQV 253
           M MSP   ++M M M+FYWGKD IILF GWP+ +L MY+LA   VF+L+AA E+ S+   
Sbjct: 20  MHMSP---SDMMMHMSFYWGKDAIILFSGWPNGSLGMYMLAFFCVFLLAAAIEIFSVSPT 76

Query: 254 VKSSGSSPMISLLIQATVYAVKMGLAYLVMLSVMSYNLGIFIVAVAGHGLGFLLVKIR 427
            K    +P+   LIQ  VYAV+MG AY+VML+VMS+NLGIFI AVAGH +GF LVK+R
Sbjct: 77  AKRGTHNPIAGALIQTCVYAVRMGFAYMVMLAVMSFNLGIFIAAVAGHTVGFFLVKVR 134


>ref|XP_002273204.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496074|gb|ADW93914.1| copper transporter [Vitis
           vinifera]
          Length = 139

 Score =  133 bits (334), Expect = 3e-29
 Identities = 67/120 (55%), Positives = 88/120 (73%)
 Frame = +2

Query: 68  MDMPMSPPVSTEMAMQMNFYWGKDVIILFQGWPSNNLAMYILALAFVFMLSAATEVMSIP 247
           MDMP S   +  M MQ +FYW KD IILF GWP+++  MYILAL FVF+L+ A EV+SIP
Sbjct: 7   MDMPPSDD-NMMMMMQNSFYWSKDAIILFSGWPNHSPFMYILALLFVFLLAVAVEVLSIP 65

Query: 248 QVVKSSGSSPMISLLIQATVYAVKMGLAYLVMLSVMSYNLGIFIVAVAGHGLGFLLVKIR 427
             +K  G+ P ++ L Q  V+AV+MGL YLVML+VMS+N+G+ +VA+AGH +GF L K R
Sbjct: 66  PTLK-QGTIPTVAALTQTVVHAVRMGLGYLVMLAVMSFNVGVLLVAIAGHAVGFFLNKYR 124


>ref|XP_004147932.1| PREDICTED: copper transporter 6-like [Cucumis sativus]
           gi|449519529|ref|XP_004166787.1| PREDICTED: copper
           transporter 6-like [Cucumis sativus]
          Length = 150

 Score =  129 bits (323), Expect = 6e-28
 Identities = 67/116 (57%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +2

Query: 83  SPPVSTEMA-MQMNFYWGKDVIILFQGWPSNNLAMYILALAFVFMLSAATEVMSIPQVVK 259
           SP +ST+M  MQM+FYWGKD +ILF  WP  +L +YILA  F+F+L+ A E +S     K
Sbjct: 23  SPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPNK 82

Query: 260 SSGSSPMISLLIQATVYAVKMGLAYLVMLSVMSYNLGIFIVAVAGHGLGFLLVKIR 427
             G SP+ S  +QA VYA + GLAYLVML+VMS+N+GIFI AVAGH LGF +VK+R
Sbjct: 83  L-GKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVKLR 137


>gb|AFK47015.1| unknown [Medicago truncatula]
          Length = 145

 Score =  123 bits (309), Expect = 3e-26
 Identities = 63/127 (49%), Positives = 88/127 (69%), Gaps = 7/127 (5%)
 Frame = +2

Query: 68  MDMPMSPPVSTEMA-------MQMNFYWGKDVIILFQGWPSNNLAMYILALAFVFMLSAA 226
           M MPM+P  S  M+       MQM+F+WGK+ I+LF GWP+N+L MYILA+ FVF+L+ A
Sbjct: 1   MGMPMAPGQSMPMSNGTMIMNMQMSFFWGKNAIVLFSGWPNNSLGMYILAILFVFILALA 60

Query: 227 TEVMSIPQVVKSSGSSPMISLLIQATVYAVKMGLAYLVMLSVMSYNLGIFIVAVAGHGLG 406
            EV+S    +K  G++P+   LIQ+ VY  ++   YL+ML+VMS+N+GIFI AV GH LG
Sbjct: 61  AEVLSNQPSIK-RGTNPLKGGLIQSGVYFFRISFIYLLMLAVMSFNVGIFIAAVLGHSLG 119

Query: 407 FLLVKIR 427
           F + + R
Sbjct: 120 FFVARSR 126


>ref|XP_003516909.1| PREDICTED: copper transporter 6-like isoform 1 [Glycine max]
           gi|356496104|ref|XP_003516910.1| PREDICTED: copper
           transporter 6-like isoform 2 [Glycine max]
          Length = 144

 Score =  122 bits (307), Expect = 5e-26
 Identities = 65/120 (54%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
 Frame = +2

Query: 71  DMPMSPPVS-TEMAMQMNFYWGKDVIILFQGWPSNNLAMYILALAFVFMLSAATEVMSIP 247
           DMPMS       M M M+ YWGKD I+LF GWP +++  YILA+ FVF L+   EV+S  
Sbjct: 8   DMPMSNGRDHNSMKMHMSLYWGKDAIVLFSGWPKHSVGHYILAILFVFFLAIIAEVVSNK 67

Query: 248 QVVKSSGSSPMISLLIQATVYAVKMGLAYLVMLSVMSYNLGIFIVAVAGHGLGFLLVKIR 427
             +K  G++P+I  L QAT Y  ++ L YLVML+VMS+NLGIFI AVAGH LGF L K R
Sbjct: 68  PNIKR-GTNPIIGGLAQATFYVFRISLLYLVMLAVMSFNLGIFIAAVAGHTLGFFLAKSR 126


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