BLASTX nr result

ID: Cnidium21_contig00042118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042118
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM35938.1| CCCH-type zinc finger protein C3H69 [Arabidopsis ...   134   1e-29
gb|ADM35937.1| CCCH-type zinc finger protein C3H69 [Arabidopsis ...   134   1e-29
sp|E0X9N4.1|C3H69_ARATH RecName: Full=Zinc finger CCCH domain-co...   134   1e-29
ref|XP_003531437.1| PREDICTED: E3 ubiquitin-protein ligase makor...   133   2e-29
ref|XP_002876728.1| hypothetical protein ARALYDRAFT_907942 [Arab...   132   3e-29

>gb|ADM35938.1| CCCH-type zinc finger protein C3H69 [Arabidopsis thaliana]
           gi|304557038|gb|ADM35943.1| CCCH-type zinc finger
           protein C3H69 [Arabidopsis thaliana]
          Length = 394

 Score =  134 bits (336), Expect = 1e-29
 Identities = 55/69 (79%), Positives = 63/69 (91%)
 Frame = -3

Query: 279 MSKRVLCKFYSHGACLKGENCEFSHDWKDPANNVCTFYQKGVCSYGSRCRYEHAKVSRSQ 100
           MSKR+LCKF++HGACLKGE+CEFSHDWKDP NN+CT+YQKG+CSYGSRCRYEH K SR  
Sbjct: 1   MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNNICTYYQKGICSYGSRCRYEHVKASRPH 60

Query: 99  PCATSSSAV 73
           P A+SSSAV
Sbjct: 61  PSASSSSAV 69


>gb|ADM35937.1| CCCH-type zinc finger protein C3H69 [Arabidopsis thaliana]
           gi|304557037|gb|ADM35942.1| CCCH-type zinc finger
           protein C3H69 [Arabidopsis thaliana]
          Length = 357

 Score =  134 bits (336), Expect = 1e-29
 Identities = 55/69 (79%), Positives = 63/69 (91%)
 Frame = -3

Query: 279 MSKRVLCKFYSHGACLKGENCEFSHDWKDPANNVCTFYQKGVCSYGSRCRYEHAKVSRSQ 100
           MSKR+LCKF++HGACLKGE+CEFSHDWKDP NN+CT+YQKG+CSYGSRCRYEH K SR  
Sbjct: 1   MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNNICTYYQKGICSYGSRCRYEHVKASRPH 60

Query: 99  PCATSSSAV 73
           P A+SSSAV
Sbjct: 61  PSASSSSAV 69


>sp|E0X9N4.1|C3H69_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 69;
           Short=AtC3H69 gi|304557030|gb|ADM35936.1| CCCH-type zinc
           finger protein C3H69 [Arabidopsis thaliana]
           gi|304557036|gb|ADM35941.1| CCCH-type zinc finger
           protein C3H69 [Arabidopsis thaliana]
          Length = 350

 Score =  134 bits (336), Expect = 1e-29
 Identities = 55/69 (79%), Positives = 63/69 (91%)
 Frame = -3

Query: 279 MSKRVLCKFYSHGACLKGENCEFSHDWKDPANNVCTFYQKGVCSYGSRCRYEHAKVSRSQ 100
           MSKR+LCKF++HGACLKGE+CEFSHDWKDP NN+CT+YQKG+CSYGSRCRYEH K SR  
Sbjct: 1   MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNNICTYYQKGICSYGSRCRYEHVKASRPH 60

Query: 99  PCATSSSAV 73
           P A+SSSAV
Sbjct: 61  PSASSSSAV 69


>ref|XP_003531437.1| PREDICTED: E3 ubiquitin-protein ligase makorin-like [Glycine max]
          Length = 363

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/90 (67%), Positives = 68/90 (75%)
 Frame = -3

Query: 279 MSKRVLCKFYSHGACLKGENCEFSHDWKDPANNVCTFYQKGVCSYGSRCRYEHAKVSRSQ 100
           MSKR LCKF++HGACLKGE+CEFSHDWKDP NNVCTFYQKGVC+YGSRCRY+H K SR Q
Sbjct: 1   MSKRFLCKFFAHGACLKGEHCEFSHDWKDPPNNVCTFYQKGVCAYGSRCRYDHVKASREQ 60

Query: 99  PCATSSSAVTLQYSGSFPVTNSSRNAASGG 10
             A SSS +  Q   S  V   +  AAS G
Sbjct: 61  SSAPSSSVIEPQTLVSDTVAFGNTRAASNG 90


>ref|XP_002876728.1| hypothetical protein ARALYDRAFT_907942 [Arabidopsis lyrata subsp.
           lyrata] gi|297322566|gb|EFH52987.1| hypothetical protein
           ARALYDRAFT_907942 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score =  132 bits (332), Expect = 3e-29
 Identities = 55/76 (72%), Positives = 64/76 (84%)
 Frame = -3

Query: 279 MSKRVLCKFYSHGACLKGENCEFSHDWKDPANNVCTFYQKGVCSYGSRCRYEHAKVSRSQ 100
           MSKR+LCKF++HGACLKGE+CEFSHDWKDP NN+CT+YQ+G+CSYGSRCRYEH K SR  
Sbjct: 1   MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNNICTYYQRGICSYGSRCRYEHVKASRPH 60

Query: 99  PCATSSSAVTLQYSGS 52
           P A+SSS V L    S
Sbjct: 61  PSASSSSPVPLSSPAS 76


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