BLASTX nr result

ID: Cnidium21_contig00042101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042101
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001148856.1| tubby protein [Zea mays] gi|195622658|gb|ACG...    45   7e-08
tpg|DAA45381.1| TPA: hypothetical protein ZEAMMB73_557743 [Zea m...    45   8e-08
tpg|DAA45380.1| TPA: tubby protein [Zea mays]                          45   8e-08
ref|XP_003557885.1| PREDICTED: tubby-like F-box protein 6-like [...    43   1e-07
ref|XP_002516864.1| phosphoric diester hydrolase, putative [Rici...    61   4e-07

>ref|NP_001148856.1| tubby protein [Zea mays] gi|195622658|gb|ACG33159.1| tubby protein
           [Zea mays]
          Length = 401

 Score = 45.1 bits (105), Expect(2) = 7e-08
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
 Frame = +1

Query: 415 SLSRSAIKPGGVAPTQTEFRHSSIDSLQHYLFTYRSQIAQMRSSLDLCQVR*TALTKIKI 594
           S+  SA+K GG  PTQTEF  SS+DS   + F +RS+ A++ SS      +      +K 
Sbjct: 257 SIPASAVKEGGKTPTQTEFPLSSLDSFPSFPF-FRSKSARIDSSTSQSSSQREDRLVLKN 315

Query: 595 KIP--DV*TQCWCNN 633
           K P      QCWC N
Sbjct: 316 KSPRWHEQLQCWCLN 330



 Score = 38.5 bits (88), Expect(2) = 7e-08
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
 Frame = +3

Query: 642 EEFQLVAKSG---ETTEREEVISQFWKVDKDVFAKDNRYPISSY 764
           + FQLVA      E+ E ++VI QF K+ KD+F  D  YPIS++
Sbjct: 341 KNFQLVASEDNGPESQESDKVILQFGKIGKDLFTMDYGYPISAF 384


>tpg|DAA45381.1| TPA: hypothetical protein ZEAMMB73_557743 [Zea mays]
           gi|414866825|tpg|DAA45382.1| TPA: hypothetical protein
           ZEAMMB73_557743 [Zea mays]
          Length = 441

 Score = 45.1 bits (105), Expect(2) = 8e-08
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
 Frame = +1

Query: 415 SLSRSAIKPGGVAPTQTEFRHSSIDSLQHYLFTYRSQIAQMRSSLDLCQVR*TALTKIKI 594
           S+  SA+K GG  PTQTEF  SS+DS   + F +RS+ A++ SS      +      +K 
Sbjct: 297 SIPASAVKEGGKTPTQTEFPLSSLDSFPSFPF-FRSKSARIDSSTSQSSSQREDRLVLKN 355

Query: 595 KIP--DV*TQCWCNN 633
           K P      QCWC N
Sbjct: 356 KSPRWHEQLQCWCLN 370



 Score = 38.1 bits (87), Expect(2) = 8e-08
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +3

Query: 642 EEFQLVAKSG---ETTEREEVISQFWKVDKDVFAKDNRYPISSY 764
           + FQLVA      E  E ++VI QF K+ KD+F  D  YPIS++
Sbjct: 381 KNFQLVASEDNGPENQESDKVILQFGKIGKDLFTMDYGYPISAF 424


>tpg|DAA45380.1| TPA: tubby protein [Zea mays]
          Length = 401

 Score = 45.1 bits (105), Expect(2) = 8e-08
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
 Frame = +1

Query: 415 SLSRSAIKPGGVAPTQTEFRHSSIDSLQHYLFTYRSQIAQMRSSLDLCQVR*TALTKIKI 594
           S+  SA+K GG  PTQTEF  SS+DS   + F +RS+ A++ SS      +      +K 
Sbjct: 257 SIPASAVKEGGKTPTQTEFPLSSLDSFPSFPF-FRSKSARIDSSTSQSSSQREDRLVLKN 315

Query: 595 KIP--DV*TQCWCNN 633
           K P      QCWC N
Sbjct: 316 KSPRWHEQLQCWCLN 330



 Score = 38.1 bits (87), Expect(2) = 8e-08
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +3

Query: 642 EEFQLVAKSG---ETTEREEVISQFWKVDKDVFAKDNRYPISSY 764
           + FQLVA      E  E ++VI QF K+ KD+F  D  YPIS++
Sbjct: 341 KNFQLVASEDNGPENQESDKVILQFGKIGKDLFTMDYGYPISAF 384


>ref|XP_003557885.1| PREDICTED: tubby-like F-box protein 6-like [Brachypodium
           distachyon]
          Length = 404

 Score = 43.1 bits (100), Expect(2) = 1e-07
 Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
 Frame = +1

Query: 415 SLSRSAIKPGGVAPTQTEFRHSSIDSLQHYLFTYRSQIAQMRSSLDLCQVR*TALTKIKI 594
           S+  SA++ GG APTQTEF  S++DS     F +RS+ A++ S+      +      +K 
Sbjct: 260 SIPASAVEEGGKAPTQTEFPRSNLDSFPSIPF-FRSKSARIDSTASQLPTQMEEKLVLKN 318

Query: 595 KIP--DV*TQCWCNN 633
           K P      QCWC N
Sbjct: 319 KSPRWHEQLQCWCLN 333



 Score = 39.3 bits (90), Expect(2) = 1e-07
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +3

Query: 642 EEFQLVAKSGE---TTEREEVISQFWKVDKDVFAKDNRYPISSY 764
           + FQLVA         E ++VI QF K+ KD+F  D RYPIS++
Sbjct: 344 KNFQLVASDDNGPANQEHDKVILQFGKIGKDLFTMDYRYPISAF 387


>ref|XP_002516864.1| phosphoric diester hydrolase, putative [Ricinus communis]
           gi|223543952|gb|EEF45478.1| phosphoric diester
           hydrolase, putative [Ricinus communis]
          Length = 390

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
 Frame = +3

Query: 495 PALSVYISKSNCTNEIFSGPLSGQIDSTY*NKNKNTRCVDTVLV*QLRY---------EE 647
           P+L  + SKSNC     SGPLS Q D     KNK+ R  + +    L +         + 
Sbjct: 272 PSLPFFRSKSNCVENFLSGPLSSQKDGALILKNKSPRWHEQLQCWCLNFHGRVTVASVKN 331

Query: 648 FQLVAKSGETT---EREEVISQFWKVDKDVFAKDNRYPISSY 764
           FQLVA         E E++I QF KV KD+F  D RYPIS++
Sbjct: 332 FQLVASPENGPPGPEHEKIILQFGKVGKDLFTMDYRYPISAF 373


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