BLASTX nr result
ID: Cnidium21_contig00042068
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00042068 (862 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACB28472.1| polyprotein [Ananas comosus] 311 1e-82 gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 286 5e-75 gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 284 2e-74 gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] 280 4e-73 emb|CAJ00278.1| hypothetical protein [Lotus japonicus] 257 3e-66 >gb|ACB28472.1| polyprotein [Ananas comosus] Length = 953 Score = 311 bits (797), Expect = 1e-82 Identities = 154/295 (52%), Positives = 207/295 (70%), Gaps = 11/295 (3%) Frame = -3 Query: 857 IPAMAVRVADGGQLICDKIIKGFSWKMQGVQFQADVMLLPLSGSDLVLGIDWFTQLGPVL 678 IPA+ V VADG +LI + F WKMQG++F+A+++LLPL G D+VLG+ W QLGP+L Sbjct: 51 IPAVNVTVADGNKLISSSTCRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPIL 110 Query: 677 WDFSKLTMQFTYQNEQVKLRGSTGKRLKGIQANKLNKLMRSVGELSMLQIIPVANAHTPQ 498 WDFSKL M+F +Q +++ LRGS+G LK I+ +L K++ LS + + + TPQ Sbjct: 111 WDFSKLRMEFQFQGQKIVLRGSSGPSLKIIEGKQLKKMVLDDTALSAVHLCSIHA--TPQ 168 Query: 497 LGNQDKVTE-----------VIPPEVTKVLNQFPTVFSAPRGLPPQRNQFDHKIPLKEGT 351 GN +E ++ +L + +F P+GLPP R DHKIPLKEGT Sbjct: 169 EGNHIATSEDAETTWSGLGKAYSQQLQLLLEEHSDLFEEPQGLPPVRLH-DHKIPLKEGT 227 Query: 350 DAVNVRPYRYSVQQKTVIEELIQEMMDQGVIRHSSSPFAAPIVLVKKKDGGWRMCTDYRG 171 + +NVRPYRY QKT IE+L+QEM+ QGVI S+SP+++P+VLVKKKDG WR+C DYR Sbjct: 228 NPINVRPYRYPAYQKTEIEKLVQEMLSQGVITPSNSPYSSPVVLVKKKDGSWRLCIDYRS 287 Query: 170 LNKATIKDKFPIPIIEELLDELHGSKYFSKIDLKSGYHQIRVSPADIHKTAFKTH 6 LN +TIKDKFPIP+++ELLDEL G+K FS++DL+SGYHQIR+ DI KTAF+TH Sbjct: 288 LNDSTIKDKFPIPLVDELLDELSGAKLFSELDLRSGYHQIRMHADDISKTAFRTH 342 >gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana] Length = 1447 Score = 286 bits (731), Expect = 5e-75 Identities = 140/281 (49%), Positives = 193/281 (68%), Gaps = 2/281 (0%) Frame = -3 Query: 842 VRVADGGQLICDKIIKGFSWKMQGVQFQADVMLLPLSGSDLVLGIDWFTQLGPVLWDFSK 663 V VADG +L D IKGF+WK+Q FQ+D++L+PL G D+VLG+ W LG + W+F K Sbjct: 413 VAVADGRKLNVDGQIKGFTWKLQSTTFQSDILLIPLQGVDMVLGVQWLETLGRISWEFKK 472 Query: 662 LTMQFTYQNEQVKLRGSTGKRLKGIQANKLNKLMRSVGELSMLQIIPVANAHTPQLGNQD 483 L MQF Y+N++V L G ++ I+A+KL K +L+M+ + V + ++G+ Sbjct: 473 LEMQFFYKNQRVWLHGIITGSVRDIKAHKLQKTQADQIQLAMVCVREVVSDEEQEIGSIS 532 Query: 482 KVTEVIPPE--VTKVLNQFPTVFSAPRGLPPQRNQFDHKIPLKEGTDAVNVRPYRYSVQQ 309 +T + E V ++ +FP VF+ P LPP R + DHKI L EG + VN RPYRY V Q Sbjct: 533 ALTSDVVEESVVQNIVEEFPDVFAEPTDLPPFREKHDHKIKLLEGANPVNQRPYRYVVHQ 592 Query: 308 KTVIEELIQEMMDQGVIRHSSSPFAAPIVLVKKKDGGWRMCTDYRGLNKATIKDKFPIPI 129 K I++++Q+M+ G I+ SSSPFA+P+VLVKKKDG WR+C DY LN T+KD+F IP+ Sbjct: 593 KDEIDKIVQDMIKSGTIQVSSSPFASPVVLVKKKDGTWRLCVDYTELNGMTVKDRFLIPL 652 Query: 128 IEELLDELHGSKYFSKIDLKSGYHQIRVSPADIHKTAFKTH 6 IE+L+DEL GS FSKIDL++GYHQ+R+ P DI KTAFKTH Sbjct: 653 IEDLMDELGGSVVFSKIDLRAGYHQVRMDPDDIQKTAFKTH 693 >gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] Length = 1499 Score = 284 bits (727), Expect = 2e-74 Identities = 135/281 (48%), Positives = 195/281 (69%), Gaps = 2/281 (0%) Frame = -3 Query: 842 VRVADGGQLICDKIIKGFSWKMQGVQFQADVMLLPLSGSDLVLGIDWFTQLGPVLWDFSK 663 V VADG +L + + FSWK+Q FQ+D++L+PL G D+VLG+ W LG + W+F K Sbjct: 434 VSVADGRKLRVEGKVTDFSWKLQTTTFQSDILLIPLQGIDMVLGVQWLETLGRISWEFKK 493 Query: 662 LTMQFTYQNEQVKLRGSTGKRLKGIQANKLNKLMRSVGELSMLQIIPVANAHTPQLGNQD 483 L M+F + N++V L G T ++ ++A KL KL +L+ML + V+ + +L + Sbjct: 494 LEMRFKFNNQKVLLHGLTSGSVREVKAQKLQKLQEDQVQLAMLCVQEVSESTEGELCTIN 553 Query: 482 KVTEVIPPE--VTKVLNQFPTVFSAPRGLPPQRNQFDHKIPLKEGTDAVNVRPYRYSVQQ 309 +T + E V +VLN++P +F P LPP R + +HKI L EG++ VN RPYRYS+ Q Sbjct: 554 ALTSELGEESVVEEVLNEYPDIFIEPTALPPFREKHNHKIKLLEGSNPVNQRPYRYSIHQ 613 Query: 308 KTVIEELIQEMMDQGVIRHSSSPFAAPIVLVKKKDGGWRMCTDYRGLNKATIKDKFPIPI 129 K I++L+++++ G ++ SSSP+A+P+VLVKKKDG WR+C DYR LN T+KD FPIP+ Sbjct: 614 KNEIDKLVEDLLTNGTVQASSSPYASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPL 673 Query: 128 IEELLDELHGSKYFSKIDLKSGYHQIRVSPADIHKTAFKTH 6 IE+L+DEL G+ FSKIDL++GYHQ+R+ P DI KTAFKTH Sbjct: 674 IEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKTAFKTH 714 >gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] Length = 1557 Score = 280 bits (715), Expect = 4e-73 Identities = 134/285 (47%), Positives = 192/285 (67%), Gaps = 4/285 (1%) Frame = -3 Query: 848 MAVRVADGGQLICDKIIKGFSWKMQGVQFQADVMLLPLSGSDLVLGIDWFTQLGPVLWDF 669 M V A GG+ + K F+W+MQG F +V LPL D+VLG+ W LGP+LWDF Sbjct: 515 MTVDAALGGKTVTLFRSKDFTWRMQGYSFTTEVRTLPLDHWDIVLGVQWLATLGPILWDF 574 Query: 668 SKLTMQFTYQNEQVKLRGSTGKRLKGIQANKLNKLMRSVGELSMLQIIPVANAHTPQLGN 489 + L M+FT + LRG+ K I+ NKLNK++ +++ LQ+ +A + Sbjct: 575 TYLRMEFTLNGAKYILRGTAKAGCKVIKGNKLNKILSQEPQVAFLQLYDPESATSVGASL 634 Query: 488 Q----DKVTEVIPPEVTKVLNQFPTVFSAPRGLPPQRNQFDHKIPLKEGTDAVNVRPYRY 321 D+ T + + +L + +F P GLPP R FDH+IP++ G V++RPYRY Sbjct: 635 SHIAVDESTSLSDATLQALLEAYEDLFIEPTGLPPFRKGFDHQIPVEAGASPVSLRPYRY 694 Query: 320 SVQQKTVIEELIQEMMDQGVIRHSSSPFAAPIVLVKKKDGGWRMCTDYRGLNKATIKDKF 141 + QK +I+ +++EM+ QG+I++SSSP+A+P+VLVKKKDG WR+C DYRG+NK TIKDK+ Sbjct: 695 NSIQKDIIDRMVREMLSQGIIQNSSSPYASPVVLVKKKDGSWRLCVDYRGVNKQTIKDKY 754 Query: 140 PIPIIEELLDELHGSKYFSKIDLKSGYHQIRVSPADIHKTAFKTH 6 PIP++E+LLDEL GS YFSK+DL++G+HQIR+ P D++KTAFKTH Sbjct: 755 PIPLLEDLLDELGGSTYFSKLDLRAGFHQIRMHPHDVYKTAFKTH 799 >emb|CAJ00278.1| hypothetical protein [Lotus japonicus] Length = 1508 Score = 257 bits (656), Expect = 3e-66 Identities = 131/289 (45%), Positives = 182/289 (62%), Gaps = 10/289 (3%) Frame = -3 Query: 842 VRVADGGQLICDKIIKGFSWKMQGVQFQADVMLLPLSGSDLVLGIDWFTQLGPVLWDFSK 663 + VADGG + +G SWKMQG F + + +PLS DL+LG+ W Q G + WDF+ Sbjct: 422 ITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTN 481 Query: 662 LTMQFTYQNEQVKLRGSTGKRLKGIQANKLNKLMRSVGELSMLQIIPV------ANAHTP 501 L M+F E V+L+ K K + A KL+ ++ +LQI+P Sbjct: 482 LIMEFAMGTEMVRLQAMEEKENKLVTAAKLHHMVGEDKFSFLLQILPCFQEVACCTIKAT 541 Query: 500 QLGNQ----DKVTEVIPPEVTKVLNQFPTVFSAPRGLPPQRNQFDHKIPLKEGTDAVNVR 333 + GN + E + +L + VF P LPP R DHKI LK+G++ V++R Sbjct: 542 ESGNSGLSSEGGNEELQAHKEAILQDYSDVFEEPAQLPPFRGIHDHKIILKDGSNPVSLR 601 Query: 332 PYRYSVQQKTVIEELIQEMMDQGVIRHSSSPFAAPIVLVKKKDGGWRMCTDYRGLNKATI 153 PYRY QK VI+++++E+++ GVI+ SSSPFA+PIVLVKKKDG WRMC DYR LN T+ Sbjct: 602 PYRYPPAQKDVIDKMVKELLESGVIQPSSSPFASPIVLVKKKDGSWRMCVDYRKLNDMTV 661 Query: 152 KDKFPIPIIEELLDELHGSKYFSKIDLKSGYHQIRVSPADIHKTAFKTH 6 K KFPIP++E+LLDEL G+K FSK+DL++GYHQ+R+ P D+ KTAF+TH Sbjct: 662 KAKFPIPLVEDLLDELGGAKIFSKLDLRAGYHQLRMRPEDVEKTAFQTH 710