BLASTX nr result

ID: Cnidium21_contig00042056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042056
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329111.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002532684.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_002316920.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
dbj|BAF02554.1| hypothetical protein [Nicotiana benthamiana]           57   1e-06
ref|NP_001118635.1| uncharacterized protein [Arabidopsis thalian...    57   2e-06

>ref|XP_002329111.1| predicted protein [Populus trichocarpa] gi|222869780|gb|EEF06911.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 51/108 (47%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
 Frame = -1

Query: 316 MQTISSKKMMARPQTPANLSSITGHYRVERYHDSKKYSIGTPRRHQHTSLRSMTLN---H 146
           M+TIS K+   R Q PA  S   G+ RV R +     S   PR     S R  ++    H
Sbjct: 1   METISQKQTRGRLQPPARQSLGEGN-RVRRNNQVASIS-PRPRSTCTCSNRPGSVRCSKH 58

Query: 145 REAPPRDKLRGRRAGKEVARRALMPPIRRLNMRWRNFQPTPSRLSNMS 2
               P DKLR  +A  E+ RRAL PP RRL +RW NFQPTPSRLSNMS
Sbjct: 59  GYLVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNFQPTPSRLSNMS 106


>ref|XP_002532684.1| conserved hypothetical protein [Ricinus communis]
           gi|223527581|gb|EEF29697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
 Frame = -1

Query: 316 MQTISSKKMMARPQTPAN---LSSITGHYRVER---YHDSKKYSIGTPRRHQHTSLRSMT 155
           MQ++S      RP+ PA      + T + RV R    H S   S   PR     S R  +
Sbjct: 1   MQSLSQTLTTERPRLPARKPVTGNATENNRVRRNYYQHSSGPASSPRPRSTCTCSNRPGS 60

Query: 154 LN---HREAPPRDKLRGR-RAGKEVARRALMPPIRRLNMRWRNFQPTPSRLSNMS 2
           +    H    P DKLR   +A +E+ RRAL PP R++++RW NF+PTPSRLSNMS
Sbjct: 61  VRCSKHGYVLPSDKLRRHHQASREILRRALAPPNRKMSLRWWNFRPTPSRLSNMS 115


>ref|XP_002316920.1| predicted protein [Populus trichocarpa] gi|222859985|gb|EEE97532.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 46/112 (41%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
 Frame = -1

Query: 316 MQTISSKKMMARPQTPANLSSITGHYRVERYHDSKKYSIGTPRRHQHTSLRS------MT 155
           M+++S K+   R Q P   +   G  RV R +      +  P R + T   S        
Sbjct: 1   MESMSQKQARGRLQLPTRQALGEGS-RVRRNNQV----VSIPPRPRSTCTCSNRPGSVRC 55

Query: 154 LNHREAPPRDKL-RGRRAGKEVARRALMPPIRRLNMRWRNFQPTPSRLSNMS 2
             H    P DKL R  +A KE+ RRAL PP RRL +RW NF+PTPSRLSNMS
Sbjct: 56  SKHGYMVPGDKLIRRHQANKELLRRALAPPNRRLTLRWFNFRPTPSRLSNMS 107


>dbj|BAF02554.1| hypothetical protein [Nicotiana benthamiana]
          Length = 109

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
 Frame = -1

Query: 316 MQTISSKKMMARPQTPANLSSITGHYRVERYHDSKKYSIGTPRRHQHTSLRSMTLNHREA 137
           M+TI+ K  +   ++P     +    R +R ++ K     +PR  QH    S     R A
Sbjct: 7   METITQKLSLLPVKSPP----VDRTNRADRKYNCKSRFPSSPRSQQHRD--SSPRISRTA 60

Query: 136 PPRDKLRGRR--AGKEVARRALMPPIRRLNMRWRNFQPTPSRLSNMS 2
                LR     A KE+ +RAL PP  RL +RW +F+PTPSRL NMS
Sbjct: 61  TSHYSLRKLHGSANKEIIKRALTPPAPRLTLRWLDFKPTPSRLCNMS 107


>ref|NP_001118635.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26450598|dbj|BAC42411.1| unknown protein [Arabidopsis
           thaliana] gi|332642164|gb|AEE75685.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 106

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
 Frame = -1

Query: 148 HREAPPRDKLRGRRAG---KEVARRALMPPIRRLNMRWRNFQPTPSRLSNMS 2
           H    P D+   R+A    +EV RRAL PPIRR+N+RW NF+PTPSRL  MS
Sbjct: 53  HGFVVPSDERLMRKASDGSREVLRRALTPPIRRMNLRWLNFRPTPSRLCKMS 104


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