BLASTX nr result

ID: Cnidium21_contig00041935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041935
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31453.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis v...   125   5e-27
emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]   125   5e-27
ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24

>emb|CBI31453.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  125 bits (313), Expect = 5e-27
 Identities = 76/139 (54%), Positives = 84/139 (60%), Gaps = 4/139 (2%)
 Frame = +2

Query: 2   IQGARHAQYGLFTQDPHFYKLQSGLFPFGFQQLDYAASLPSKIPVHEFNKPPEKNEKISC 181
           IQGARHAQ+GL + D HF KLQ GLFP G QQ     + PS I         E NE ISC
Sbjct: 344 IQGARHAQFGLSSSDLHFNKLQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISC 403

Query: 182 LLTIGXXXXXXXXXXXXKPTHSFFLFGQPILTEQQLSQSCSGDTVGSNSLNG----IANP 349
           LLTIG            K  + FFLFGQPIL EQQ+SQSCSGDT G +S +G      N 
Sbjct: 404 LLTIGNSTQNSKKNNEIKAPY-FFLFGQPILIEQQVSQSCSGDTAGISSSDGNPEKTPNF 462

Query: 350 SDGSGSAVVQNGALDSSSD 406
           SDGSGSA  QNG  +SSSD
Sbjct: 463 SDGSGSAFHQNGPQESSSD 481


>ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
          Length = 683

 Score =  125 bits (313), Expect = 5e-27
 Identities = 76/139 (54%), Positives = 84/139 (60%), Gaps = 4/139 (2%)
 Frame = +2

Query: 2   IQGARHAQYGLFTQDPHFYKLQSGLFPFGFQQLDYAASLPSKIPVHEFNKPPEKNEKISC 181
           IQGARHAQ+GL + D HF KLQ GLFP G QQ     + PS I         E NE ISC
Sbjct: 444 IQGARHAQFGLSSSDLHFNKLQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISC 503

Query: 182 LLTIGXXXXXXXXXXXXKPTHSFFLFGQPILTEQQLSQSCSGDTVGSNSLNG----IANP 349
           LLTIG            K  + FFLFGQPIL EQQ+SQSCSGDT G +S +G      N 
Sbjct: 504 LLTIGNSTQNSKKNNEIKAPY-FFLFGQPILIEQQVSQSCSGDTAGISSSDGNPEKTPNF 562

Query: 350 SDGSGSAVVQNGALDSSSD 406
           SDGSGSA  QNG  +SSSD
Sbjct: 563 SDGSGSAFHQNGPQESSSD 581


>emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
          Length = 680

 Score =  125 bits (313), Expect = 5e-27
 Identities = 76/139 (54%), Positives = 84/139 (60%), Gaps = 4/139 (2%)
 Frame = +2

Query: 2   IQGARHAQYGLFTQDPHFYKLQSGLFPFGFQQLDYAASLPSKIPVHEFNKPPEKNEKISC 181
           IQGARHAQ+GL + D HF KLQ GLFP G QQ     + PS I         E NE ISC
Sbjct: 460 IQGARHAQFGLSSSDLHFNKLQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISC 519

Query: 182 LLTIGXXXXXXXXXXXXKPTHSFFLFGQPILTEQQLSQSCSGDTVGSNSLNG----IANP 349
           LLTIG            K  + FFLFGQPIL EQQ+SQSCSGDT G +S +G      N 
Sbjct: 520 LLTIGNSTQNSKKNNEIKAPY-FFLFGQPILIEQQVSQSCSGDTAGISSSDGNPEKTPNF 578

Query: 350 SDGSGSAVVQNGALDSSSD 406
           SDGSGSA  QNG  +SSSD
Sbjct: 579 SDGSGSAFHQNGPQESSSD 597


>ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|222850909|gb|EEE88456.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score =  123 bits (308), Expect = 2e-26
 Identities = 73/137 (53%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
 Frame = +2

Query: 2   IQGARHAQYGLFTQDPHFYKLQSGLFPFGFQQLDYAASLPSKIPVHEFNKPPEKNEKISC 181
           IQGARHAQ+ L + D HF KLQSGLFP  FQ+ D+AAS PS+I    F    +K+E ISC
Sbjct: 433 IQGARHAQFELSSSDLHFNKLQSGLFPVDFQRRDHAAS-PSRISSGNFMGNTKKSENISC 491

Query: 182 LLTIGXXXXXXXXXXXXKPTHSFFLFGQPILTEQQLSQSCSGDTVGSNSLNGIAN--PSD 355
           LLT+G            K  H F LFGQ I+T+QQ SQSCSGDT  ++S +G      SD
Sbjct: 492 LLTMGNSSQSLKESSETKTPH-FVLFGQLIVTDQQSSQSCSGDTNANSSSDGNLGKASSD 550

Query: 356 GSGSAVVQNGALDSSSD 406
           GSGSA+ QNG +++SSD
Sbjct: 551 GSGSALQQNGPMENSSD 567


>ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|222865410|gb|EEF02541.1|
           predicted protein [Populus trichocarpa]
          Length = 669

 Score =  114 bits (286), Expect = 6e-24
 Identities = 70/136 (51%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
 Frame = +2

Query: 2   IQGARHAQYGLFTQDPHFYKLQSGLFPFGFQQLDYAASLPSKIPVHEFNKPPEKNEKISC 181
           IQGARHAQ+GL + D HF KLQ+GLFP  FQ+LD AA  PS+I    F    + +E ISC
Sbjct: 432 IQGARHAQFGLSSSDLHFNKLQAGLFPVDFQRLDRAAP-PSRISNSNFVGNTQNSESISC 490

Query: 182 LLTIGXXXXXXXXXXXXKPTHSFFLFGQPILTEQQLSQSCSGDTVGSNSLNGIANP--SD 355
           LLT+G             P     LFGQ I+T+QQ SQSCSGDT  ++S +G      SD
Sbjct: 491 LLTMGNSSQGMKGSDTKTP--HILLFGQLIVTDQQSSQSCSGDTNANSSSDGHPGKAISD 548

Query: 356 GSGSAVVQNGALDSSS 403
           GSGSA  QNG L++SS
Sbjct: 549 GSGSASQQNGPLENSS 564


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