BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041840
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520026.1| pentatricopeptide repeat-containing protein,...    72   5e-11
ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
emb|CBI26526.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07

>ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540790|gb|EEF42350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1040

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = +1

Query: 1   LKQA*EVFTAVADSSKARKVLYGSMIDAFANCGTSEEAYLFFREETVKGHDLDDVAISML 180
           LKQA EVF AVADS    K +  SMIDA+A CG SE+AY  +RE T +G +L  V +S++
Sbjct: 634 LKQAQEVFAAVADSPVCGKPIVNSMIDAYAKCGKSEDAYSLYREVTDRGLNLGAVGVSII 693

Query: 181 VNVLTDRGKN 210
           V  L++RGK+
Sbjct: 694 VKALSNRGKH 703


>ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|222862256|gb|EEE99762.1|
           predicted protein [Populus trichocarpa]
          Length = 1071

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/70 (52%), Positives = 44/70 (62%)
 Frame = +1

Query: 1   LKQA*EVFTAVADSSKARKVLYGSMIDAFANCGTSEEAYLFFREETVKGHDLDDVAISML 180
           LKQA EVF AVADS      +  SMIDA   CG  EEAYL + E   +GH+L  V I M+
Sbjct: 681 LKQAQEVFAAVADSPILGNPIINSMIDACVKCGKFEEAYLLYEEVAQRGHNLGAVGIGMV 740

Query: 181 VNVLTDRGKN 210
           VN LT+ GK+
Sbjct: 741 VNALTNSGKH 750


>ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Glycine max]
          Length = 1079

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = +1

Query: 1   LKQA*EVFTAVADSSKARKVLYGSMIDAFANCGTSEEAYLFFREETVKGHDLDDVAISML 180
           LKQA ++F    +S  + KVLY SMI+A+A CG  E+AYL +++ T +G DL  V IS+ 
Sbjct: 699 LKQAEDIFAEYINSPTSSKVLYNSMINAYAKCGKQEKAYLLYKQATGEGRDLGAVGISIA 758

Query: 181 VNVLTDRGKN 210
           VN LT+ GK+
Sbjct: 759 VNSLTNGGKH 768


>emb|CBI26526.3| unnamed protein product [Vitis vinifera]
          Length = 1005

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/70 (47%), Positives = 49/70 (70%)
 Frame = +1

Query: 1   LKQA*EVFTAVADSSKARKVLYGSMIDAFANCGTSEEAYLFFREETVKGHDLDDVAISML 180
           LK+A EVF+A+ +   + K++Y SMIDA+A CG +EEAY  + E T KG +L  V+IS +
Sbjct: 626 LKKAIEVFSAI-EGCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKV 684

Query: 181 VNVLTDRGKN 210
           V+ L + GK+
Sbjct: 685 VHALANYGKH 694


>ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Vitis vinifera]
          Length = 1071

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/70 (47%), Positives = 49/70 (70%)
 Frame = +1

Query: 1   LKQA*EVFTAVADSSKARKVLYGSMIDAFANCGTSEEAYLFFREETVKGHDLDDVAISML 180
           LK+A EVF+A+ +   + K++Y SMIDA+A CG +EEAY  + E T KG +L  V+IS +
Sbjct: 692 LKKAIEVFSAI-EGCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKV 750

Query: 181 VNVLTDRGKN 210
           V+ L + GK+
Sbjct: 751 VHALANYGKH 760