BLASTX nr result

ID: Cnidium21_contig00041806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041806
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446100.1| hypothetical protein SORBIDRAFT_06g001780 [S...    60   2e-07
gb|AFW85617.1| hypothetical protein ZEAMMB73_558830 [Zea mays]         60   2e-07
gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]         59   5e-07
ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea ma...    59   5e-07
gb|AFW85625.1| hypothetical protein ZEAMMB73_204953 [Zea mays]         56   3e-06

>ref|XP_002446100.1| hypothetical protein SORBIDRAFT_06g001780 [Sorghum bicolor]
           gi|241937283|gb|EES10428.1| hypothetical protein
           SORBIDRAFT_06g001780 [Sorghum bicolor]
          Length = 560

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
 Frame = +3

Query: 57  SSLFQLLNEMGD-EFPNNAEFDSFNFPTVMDKSGAKSLAKKYGFPPEIK-VRVPGPGDRT 230
           S LF      GD  +P  AE  S     +  +    +L  KYG P E+K VR        
Sbjct: 25  SQLFFSKGGGGDLSWPAAAEISS----ALTKQKSLVALCDKYGVPGELKPVRAVSLRCAA 80

Query: 231 CNWHHE---KLFVYKEAILSGFRFPVHPFVVRLLAEVKINPCQLYPNSWRFIFIFMVRC 398
           C    +    L +Y +A+ +G RFP+H F ++LL   ++ P QL PN+W+++  F++RC
Sbjct: 81  CETPPKGSNALCIYSDALEAGLRFPLHDFYLKLLRHYRLAPSQLVPNAWKYMAAFVLRC 139


>gb|AFW85617.1| hypothetical protein ZEAMMB73_558830 [Zea mays]
          Length = 355

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 45/91 (49%)
 Frame = +3

Query: 144 DKSGAKSLAKKYGFPPEIKVRVPGPGDRTCNWHHEKLFVYKEAILSGFRFPVHPFVVRLL 323
           D S   +L+ KYG P +    +P    R C+     + VY  A+ +G R P+H F   +L
Sbjct: 4   DGSSGGALSGKYGVPEQYSAVLPAGHQRACSPPGSAVSVYAHALEAGMRVPLHGFFCEVL 63

Query: 324 AEVKINPCQLYPNSWRFIFIFMVRCHQEDIA 416
           A   + P Q+ PN WR +  F+V  H   +A
Sbjct: 64  AHFGVAPSQIAPNGWRAMAGFVVLSHSAGVA 94


>gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]
          Length = 407

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/85 (32%), Positives = 43/85 (50%)
 Frame = +3

Query: 162 SLAKKYGFPPEIKVRVPGPGDRTCNWHHEKLFVYKEAILSGFRFPVHPFVVRLLAEVKIN 341
           +L +KYG P +    +P    R C+     + VY  A+ +G R P+H F   +LA   + 
Sbjct: 62  ALCRKYGVPEQYSAVLPAGHQRACSPPGSAVSVYAHALEAGMRVPLHGFFCEVLAHFGVA 121

Query: 342 PCQLYPNSWRFIFIFMVRCHQEDIA 416
           P Q+ PN WR +  F+V  H   +A
Sbjct: 122 PSQIAPNGWRAMAGFVVLSHSAGVA 146


>ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea mays]
           gi|194694258|gb|ACF81213.1| unknown [Zea mays]
           gi|413952966|gb|AFW85615.1| hypothetical protein
           ZEAMMB73_558830 [Zea mays]
          Length = 513

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/85 (32%), Positives = 43/85 (50%)
 Frame = +3

Query: 162 SLAKKYGFPPEIKVRVPGPGDRTCNWHHEKLFVYKEAILSGFRFPVHPFVVRLLAEVKIN 341
           +L +KYG P +    +P    R C+     + VY  A+ +G R P+H F   +LA   + 
Sbjct: 62  ALCRKYGVPEQYSAVLPAGHQRACSPPGSAVSVYAHALEAGMRVPLHGFFCEVLAHFGVA 121

Query: 342 PCQLYPNSWRFIFIFMVRCHQEDIA 416
           P Q+ PN WR +  F+V  H   +A
Sbjct: 122 PSQIAPNGWRAMAGFVVLSHSAGVA 146


>gb|AFW85625.1| hypothetical protein ZEAMMB73_204953 [Zea mays]
          Length = 331

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
 Frame = +3

Query: 81  EMGDEFPNNAEFDSFN------FPTVMDKSGA-KSLAKKYGFPPEIKVRVPGPGDRTCNW 239
           E+GD   N++  D+ +      F +  +  G+  +L +KYG P E    +P   +R C+ 
Sbjct: 28  EVGDIDENDSSDDALSGLGAERFASSFETQGSIDALCRKYGVPEEYSTVLPAGHERACSP 87

Query: 240 HHEKLFVYKEAILSGFRFPVHPFVVRLLAEVKINPCQLYPNSWRFIFIFMVRCH 401
               + VY  A+ +    P+H F   +L    + P Q+ PN WR I  F+ R H
Sbjct: 88  PGFAVSVYAHALETSMPVPLHGFFCEVLGHFGVAPSQIAPNGWRAIASFVFRSH 141


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