BLASTX nr result
ID: Cnidium21_contig00041786
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00041786 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002534290.1| conserved hypothetical protein [Ricinus comm... 118 6e-25 ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|2... 115 5e-24 ref|NP_566005.1| transcription termination factor domain-contain... 112 3e-23 ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arab... 110 2e-22 ref|XP_004158334.1| PREDICTED: uncharacterized protein LOC101224... 108 3e-22 >ref|XP_002534290.1| conserved hypothetical protein [Ricinus communis] gi|223525568|gb|EEF28093.1| conserved hypothetical protein [Ricinus communis] Length = 372 Score = 118 bits (295), Expect = 6e-25 Identities = 65/114 (57%), Positives = 84/114 (73%), Gaps = 7/114 (6%) Frame = +1 Query: 10 RKSLHFDSILRNPFHKYPQNLLDSMNSIHKPNQNPC-----FQEP-RVSRI-RPFSAQPN 168 R++L F +I NP K+ + S++S+ K QNPC F +P RVS++ FS + Sbjct: 8 RRALTFFTI-SNPSQKFCTKIT-SLSSVIKTQQNPCARIPRFDDPFRVSQLGASFSTSSS 65 Query: 169 KFPEYEMPTVTWGVVQGRKEKLVSRVIVCDYLKGIGIIPDELEQLELPSTVDVM 330 KFPEYEMP+VTWGVVQG++EKLV+RVI+CDYL +GIIPDELE LELPSTV+VM Sbjct: 66 KFPEYEMPSVTWGVVQGKREKLVNRVIICDYLNNLGIIPDELENLELPSTVEVM 119 >ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|222835695|gb|EEE74130.1| predicted protein [Populus trichocarpa] Length = 514 Score = 115 bits (287), Expect = 5e-24 Identities = 59/97 (60%), Positives = 67/97 (69%), Gaps = 7/97 (7%) Frame = +1 Query: 61 PQNLLDSMNSIHKPNQNPCFQEPRVSR-------IRPFSAQPNKFPEYEMPTVTWGVVQG 219 PQ + I K QNPC Q P FS Q +KF EYEMP+VTWGVVQG Sbjct: 21 PQKFYTNPALISKTQQNPCPQNPLTQNPLGVLQFYALFSTQASKFHEYEMPSVTWGVVQG 80 Query: 220 RKEKLVSRVIVCDYLKGIGIIPDELEQLELPSTVDVM 330 +KEKLV+RVI+CDYLKG+GIIPDELE LELPSTV+VM Sbjct: 81 KKEKLVNRVIICDYLKGLGIIPDELESLELPSTVEVM 117 >ref|NP_566005.1| transcription termination factor domain-containing protein [Arabidopsis thaliana] gi|3212859|gb|AAC23410.1| expressed protein [Arabidopsis thaliana] gi|14532592|gb|AAK64024.1| unknown protein [Arabidopsis thaliana] gi|19310761|gb|AAL85111.1| unknown protein [Arabidopsis thaliana] gi|330255268|gb|AEC10362.1| transcription termination factor domain-containing protein [Arabidopsis thaliana] Length = 507 Score = 112 bits (280), Expect = 3e-23 Identities = 56/111 (50%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Frame = +1 Query: 1 SFLRKSLHFDSILRNPFHKYPQNLLDSMNSIHKPNQNPCFQEP-RVSRIRPFSAQPNKFP 177 S+L + F ++L+ +P ++ I+ P FQ P + RI ++ Q +KFP Sbjct: 2 SYLLRRNKFVALLKRQSLIFPITSTEAKTLINPDPNIPQFQNPCSIFRIAHYATQSSKFP 61 Query: 178 EYEMPTVTWGVVQGRKEKLVSRVIVCDYLKGIGIIPDELEQLELPSTVDVM 330 EYEMPTVTWGV+QG+KEKLV+RV +CDYLKG+GII DELE +ELPST++VM Sbjct: 62 EYEMPTVTWGVIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVM 112 >ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp. lyrata] gi|297327784|gb|EFH58204.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp. lyrata] Length = 508 Score = 110 bits (274), Expect = 2e-22 Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 1/103 (0%) Frame = +1 Query: 25 FDSILRNPFHKYPQNLLDSMNSIHKPNQNPCFQEP-RVSRIRPFSAQPNKFPEYEMPTVT 201 F +++R +P ++ I+ P FQ P + RI ++ Q +KFPEYEMPTVT Sbjct: 11 FLALIRRQSLIFPITSTETKTLINPDPNIPQFQNPCSIFRIAHYATQSSKFPEYEMPTVT 70 Query: 202 WGVVQGRKEKLVSRVIVCDYLKGIGIIPDELEQLELPSTVDVM 330 WGV+QG+KEKLV+RV +CDYLKG+GII DELE +ELPST++VM Sbjct: 71 WGVIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVM 113 >ref|XP_004158334.1| PREDICTED: uncharacterized protein LOC101224846 [Cucumis sativus] Length = 516 Score = 108 bits (271), Expect = 3e-22 Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 7/81 (8%) Frame = +1 Query: 109 NPCFQEPRVS---RIRP----FSAQPNKFPEYEMPTVTWGVVQGRKEKLVSRVIVCDYLK 267 NPC + + R+ P +S Q +K PEYEMPTVTWG VQGRKEKLVSRVI+CDYLK Sbjct: 42 NPCAHQSHIQSFWRVFPLGVLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLK 101 Query: 268 GIGIIPDELEQLELPSTVDVM 330 +GI+PDELE LELPSTV+VM Sbjct: 102 SLGIVPDELEHLELPSTVEVM 122