BLASTX nr result

ID: Cnidium21_contig00041777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041777
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding...   141   6e-32
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...   141   6e-32
ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Popu...   141   6e-32
ref|XP_003622567.1| Receptor-like protein kinase [Medicago trunc...   139   2e-31
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   137   7e-31

>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine
            max]
          Length = 1482

 Score =  141 bits (355), Expect = 6e-32
 Identities = 78/106 (73%), Positives = 84/106 (79%)
 Frame = +1

Query: 1    QASGXXXXXXXXXXXXHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERF 180
            QASG            H SGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERF
Sbjct: 967  QASGKLLILDQLLQKLHYSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERF 1026

Query: 181  AAIRSFSKLAAKGDPDFKALDDKNDAFVFMISTRAGGVGLNLVAAD 318
            AAIRSFS  +A    + +A  D+N+AFVF+ISTRAGGVGLNLVAAD
Sbjct: 1027 AAIRSFSSSSANMGLNSEA--DQNEAFVFIISTRAGGVGLNLVAAD 1070


>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835143|gb|EEE73578.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 866

 Score =  141 bits (355), Expect = 6e-32
 Identities = 75/106 (70%), Positives = 82/106 (77%)
 Frame = +1

Query: 1   QASGXXXXXXXXXXXXHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERF 180
           +ASG            HDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGS+RAEERF
Sbjct: 358 KASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEERF 417

Query: 181 AAIRSFSKLAAKGDPDFKALDDKNDAFVFMISTRAGGVGLNLVAAD 318
           AAIRSFS  + +   +     D+N +FVFMISTRAGGVGLNLVAAD
Sbjct: 418 AAIRSFSGQSGRSGSE----SDQNSSFVFMISTRAGGVGLNLVAAD 459


>ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa]
           gi|222835142|gb|EEE73577.1| hypothetical protein
           POPTRDRAFT_781297 [Populus trichocarpa]
          Length = 485

 Score =  141 bits (355), Expect = 6e-32
 Identities = 75/106 (70%), Positives = 82/106 (77%)
 Frame = +1

Query: 1   QASGXXXXXXXXXXXXHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERF 180
           +ASG            HDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGS+RAEERF
Sbjct: 367 KASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEERF 426

Query: 181 AAIRSFSKLAAKGDPDFKALDDKNDAFVFMISTRAGGVGLNLVAAD 318
           AAIRSFS  + +   +     D+N +FVFMISTRAGGVGLNLVAAD
Sbjct: 427 AAIRSFSGQSGRSGSE----SDQNSSFVFMISTRAGGVGLNLVAAD 468


>ref|XP_003622567.1| Receptor-like protein kinase [Medicago truncatula]
           gi|355497582|gb|AES78785.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 1772

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/106 (71%), Positives = 83/106 (78%)
 Frame = +1

Query: 1   QASGXXXXXXXXXXXXHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERF 180
           QASG            H +GHRVLLFAQMTHTLDILQD+LEL KYSYERLDGSIRAEERF
Sbjct: 500 QASGKLLILDQLLRKLHHNGHRVLLFAQMTHTLDILQDYLELSKYSYERLDGSIRAEERF 559

Query: 181 AAIRSFSKLAAKGDPDFKALDDKNDAFVFMISTRAGGVGLNLVAAD 318
           AAIRSFS  +A    +F+A  ++N AFVFMISTRAGGVGLNLVAAD
Sbjct: 560 AAIRSFSNSSANTGLNFEA--NQNGAFVFMISTRAGGVGLNLVAAD 603


>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
           vinifera]
          Length = 876

 Score =  137 bits (346), Expect = 7e-31
 Identities = 73/106 (68%), Positives = 83/106 (78%)
 Frame = +1

Query: 1   QASGXXXXXXXXXXXXHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERF 180
           QASG            ++SGHRVLLFAQMTHTLDILQDF+ELRKYSYERLDGS+RAEERF
Sbjct: 362 QASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLDGSVRAEERF 421

Query: 181 AAIRSFSKLAAKGDPDFKALDDKNDAFVFMISTRAGGVGLNLVAAD 318
           +AIRSFS+   +G     + D ++ AFVFMISTRAGGVGLNLVAAD
Sbjct: 422 SAIRSFSRQIVEG--SLNSQDVQSSAFVFMISTRAGGVGLNLVAAD 465


Top