BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041773
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08132.1| Putative non-LTR retroelement reverse transcripta...    62   3e-10
emb|CAN69266.1| hypothetical protein VITISV_043642 [Vitis vinifera]    56   5e-06

>gb|ABN08132.1| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 532

 Score = 62.4 bits (150), Expect(2) = 3e-10
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
 Frame = +3

Query: 9   FHKDFRWIVGSGNSILFWMDNWTQEGTLCEVFHRLFYVSIWKRSNVKHFLETAWNVDVYG 188
           F ++ R +VG GN+  FW D+W  E  LC  F RLF +++ K  +V   +   W     G
Sbjct: 234 FDENIRRVVGDGNNTFFWYDSWVGEMPLCTKFPRLFDLAVNKECSVGEMVTLGWAEG--G 291

Query: 189 RS-LWSRPLRQWE----REEALKLWNIVIKVHLSNRNGQLIWDPSGNPLTAKDCYQAIIP 353
           R+ +W R L  WE    RE  L L N+V++V++ ++   L+ DP  N  + ++ Y+ I  
Sbjct: 292 RAWVWRRGLLAWEEDSVRECTLLLHNVVLQVNVPDKWSWLL-DPI-NGYSVRESYRHITT 349

Query: 354 SQNVV 368
           S   V
Sbjct: 350 SGEYV 354



 Score = 27.7 bits (60), Expect(2) = 3e-10
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +1

Query: 457 HLLRSRLKWFFDSDLCLRCLKNAESQDHLFWDCEDFYWIWVFVNRW 594
           +L+R R+      D    C K  ES  HLF DC     +W+ V  W
Sbjct: 388 NLMRRRIILANVVDCVYECGK-LESATHLFLDCRIPTMVWLHVQNW 432


>emb|CAN69266.1| hypothetical protein VITISV_043642 [Vitis vinifera]
          Length = 576

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 23/119 (19%)
 Frame = +3

Query: 27  WIVGSGNSILFWMDNWTQEGTLCEVFHRLFYVSIWKRSNVKHFLETAWNVDVYGRS---L 197
           ++VG+G  I FW D W  + +LC  F  LF +++ K + VK      W  +  G S   L
Sbjct: 279 FVVGNGKRIKFWKDIWCGDESLCVSFPSLFALAVSKDAWVK----DVWRCNEGGGSWSPL 334

Query: 198 WSRPLRQWEREEALKLWNIV-------------IKVHLSNRNGQL-------IWDPSGN 314
           +SRP   WE EEA  LW ++             +K  LS  NG         +W  SGN
Sbjct: 335 FSRPFNDWELEEARTLWVLLFSMFGVQWVLPATVKETLSGWNGSFVGKKRKGVWKASGN 393