BLASTX nr result

ID: Cnidium21_contig00041746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041746
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528831.1| PREDICTED: uncharacterized protein LOC100784...    62   5e-08
ref|XP_003622448.1| Resistance protein RGC2 [Medicago truncatula...    62   5e-08
gb|AAP45720.1| RGC2-like protein [Cichorium endivia]                   62   5e-08
gb|AEB06128.1| Rpp4 candidate R5 [Glycine max]                         62   6e-08
ref|XP_002517608.1| Disease resistance protein RPS2, putative [R...    61   8e-08

>ref|XP_003528831.1| PREDICTED: uncharacterized protein LOC100784448 [Glycine max]
          Length = 524

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
 Frame = +3

Query: 33  LFDVTVAFPSLEYIQVDGCHSLRSMFPSSVARHLTHLKEMKVEKCNEMREIIEAGEQ--E 206
           L   TV+F +L Y++V+ C SL  +F SS AR L  LK M++  CN + EI+ + E+  E
Sbjct: 381 LVPCTVSFSNLTYLKVESCKSLLYLFTSSTARSLGQLKTMEISWCNSIEEIVSSTEEGDE 440

Query: 207 IADNGILFPQLTNIYLHELQSLMSFW 284
             +N I+F QL  + L  L+ L  F+
Sbjct: 441 SDENEIIFQQLNCLKLEGLRKLRRFY 466


>ref|XP_003622448.1| Resistance protein RGC2 [Medicago truncatula]
            gi|355497463|gb|AES78666.1| Resistance protein RGC2
            [Medicago truncatula]
          Length = 1022

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = +3

Query: 48   VAFPSLEYIQVDGCHSLRSMFPSSVARHLTHLKEMKVEKCNEMREIIEA-GEQEIADNGI 224
            V+F SL+Y+ V  C  +  +F SS A+ L  LK MK+E C  M+EI+   G++   D  +
Sbjct: 814  VSFSSLKYLDVSICSGMLYLFTSSTAKSLCRLKVMKIESCESMQEIVSTEGDESGEDKKL 873

Query: 225  LFPQLTNIYLHELQSLMSFWCDQGGKASAC 314
            +F  L  ++L +L  L  F+    GK S C
Sbjct: 874  IFEDLRTLFLKDLSKLRCFY---SGKFSLC 900


>gb|AAP45720.1| RGC2-like protein [Cichorium endivia]
          Length = 408

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
 Frame = +3

Query: 54  FPSLEYIQVDGCHSLRSMFPSSVARHLTHLKEMKVEKCNEMRE-------IIEAGEQEIA 212
           FP+L  + +  C++LR +F SS+   L  L+E+ +  C+ M E       +I+A E+E +
Sbjct: 313 FPNLTRVHISSCYNLRHVFSSSMVGSLLQLQELDILLCDRMEEVIVNDANVIQAEEEEES 372

Query: 213 D---NGILFPQLTNIYLHELQSLMSFWCDQGG 299
           D   N +  P+L +I LH L SL  FW  +GG
Sbjct: 373 DGKKNEMTLPRLKSIKLHALSSLKGFWLGEGG 404


>gb|AEB06128.1| Rpp4 candidate R5 [Glycine max]
          Length = 4316

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6    VHPYAQYQPLFDVTVAFPSLEYIQVDGCHSLRSMFPSSVARHLTHLKEMKVEKCNEMREI 185
            +H  ++ + +    V+F SL+ +QV  C  +  +F SS A+ L  LK + +EKC  ++EI
Sbjct: 3653 IHKCSRLEKVVSCAVSFISLKELQVSECERMEYLFTSSTAKSLVQLKMLYIEKCESIKEI 3712

Query: 186  I-EAGEQEIADNGILFPQLTNIYLHELQSLMSFWCDQGGKASAC 314
            + +  E + +D  ++F +LT + L  L  L+ F+   G    +C
Sbjct: 3713 VRKEDESDASDEEMIFGRLTKLRLESLGRLVRFYSGDGTLQFSC 3756



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
 Frame = +3

Query: 48   VAFPSLEYIQVDGCHSLRSMFPSSVARHLTHLKEMKVEKCNEMREIIEAGEQEIADNGIL 227
            ++FP+L+ + V  C SL ++ P S+AR+L  LK +++E C+E+ EI+  G++++ ++   
Sbjct: 1749 LSFPNLQEVTVLNCRSLATLLPLSLARNLGKLKTLQIEFCHELVEIV--GKEDVTEHATT 1806

Query: 228  ----FPQLTNIYLHELQSLMSFW 284
                FP L  + LHEL  L  F+
Sbjct: 1807 EMFEFPCLWKLVLHELSMLSCFY 1829


>ref|XP_002517608.1| Disease resistance protein RPS2, putative [Ricinus communis]
            gi|223543240|gb|EEF44772.1| Disease resistance protein
            RPS2, putative [Ricinus communis]
          Length = 1658

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = +3

Query: 54   FPSLEYIQVDGCHSLRSMFPSSVARHLTHLKEMKVEKCNEMREIIEA---GEQEIADNGI 224
            F  LE ++V+ C SLRS+F  SVA  L  LK +K+  C  + EIIE     E E ADN I
Sbjct: 1504 FQHLEILKVNDCSSLRSIFCLSVAASLQQLKTLKISNCKMIMEIIEKEDDKEHEAADNKI 1563

Query: 225  LFPQLTNIYLHELQSLMSFW 284
              P+L N+ +  L SL +F+
Sbjct: 1564 ELPELRNLTMENLPSLEAFY 1583



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = +3

Query: 36   FDVTVAFPSLEYIQVDGCHSLRSMFPSSVARHLTHLKEMKVEKCNEMREII-EAGEQEIA 212
            F  T  F +L  + V+GC SL+ +F   +A  L++L+ +++  C  M  I+ +AGE E A
Sbjct: 1005 FQGTQGFQNLRLLTVEGCRSLKILFSPCIATLLSNLQVLEITSCEAMEGIVPKAGEDEKA 1064

Query: 213  DNGILFPQLTNIYLHELQSLMSFWCDQGGKASACKVPL 326
             N +LFP L ++ L  L +LM+F  D    A+A + PL
Sbjct: 1065 -NAMLFPHLNSLKLVHLPNLMNFCSD----ANASEWPL 1097


Top