BLASTX nr result

ID: Cnidium21_contig00041735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041735
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonin...   153   2e-35
ref|XP_004170765.1| PREDICTED: LOW QUALITY PROTEIN: LRR receptor...   149   3e-34
ref|XP_004143765.1| PREDICTED: LRR receptor-like serine/threonin...   149   3e-34
ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonin...   144   1e-32
ref|XP_002321080.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32

>ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2
           [Vitis vinifera] gi|147802220|emb|CAN68268.1|
           hypothetical protein VITISV_029909 [Vitis vinifera]
          Length = 1066

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/117 (62%), Positives = 90/117 (76%)
 Frame = -2

Query: 352 EIGRLLKLRVLDVSRNSLTDEIPKELGNCLKLSVLVLTNLVDFSEDDESSVGIFRGEFNA 173
           EIGR+ +LRVLDVSRNSLTD IPKEL NC +LSV+VLTNL DFS  +++      GEFNA
Sbjct: 248 EIGRISQLRVLDVSRNSLTDGIPKELANCRELSVIVLTNLDDFSSAEDNLADSSSGEFNA 307

Query: 172 FEGGIPYEVFSLPNLRVLWAPRGNFGGQLPSNWTESCSLRVLNLAQNKFNGLLHKSM 2
           F GG+PYE+  LP L++ WAPR N GG+LPSNW++SCSLR LNL QN  +  + +SM
Sbjct: 308 FMGGVPYELLLLPKLQIFWAPRANLGGRLPSNWSDSCSLRALNLGQNYISAAVPESM 364


>ref|XP_004170765.1| PREDICTED: LOW QUALITY PROTEIN: LRR receptor-like
           serine/threonine-protein kinase RPK2-like [Cucumis
           sativus]
          Length = 1041

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/117 (62%), Positives = 90/117 (76%)
 Frame = -2

Query: 352 EIGRLLKLRVLDVSRNSLTDEIPKELGNCLKLSVLVLTNLVDFSEDDESSVGIFRGEFNA 173
           EIG++ +LR+LDVSRNSLTD IPKELGNC KLS +VLTNL D + D++S     RGEFNA
Sbjct: 242 EIGQISELRILDVSRNSLTDSIPKELGNCRKLSQIVLTNLNDINPDNDS----LRGEFNA 297

Query: 172 FEGGIPYEVFSLPNLRVLWAPRGNFGGQLPSNWTESCSLRVLNLAQNKFNGLLHKSM 2
           F GGIP  +  LP+L+VLWAPRGNF G+LP+NW   CSL+VLNL QN   G + +S+
Sbjct: 298 FNGGIPSGLLLLPSLQVLWAPRGNFNGRLPTNWNSLCSLKVLNLGQNYITGTIPESI 354


>ref|XP_004143765.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like [Cucumis sativus]
          Length = 1041

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/117 (62%), Positives = 90/117 (76%)
 Frame = -2

Query: 352 EIGRLLKLRVLDVSRNSLTDEIPKELGNCLKLSVLVLTNLVDFSEDDESSVGIFRGEFNA 173
           EIG++ +LR+LDVSRNSLTD IPKELGNC KLS +VLTNL D + D++S     RGEFNA
Sbjct: 242 EIGQISELRILDVSRNSLTDSIPKELGNCRKLSQIVLTNLNDINPDNDS----LRGEFNA 297

Query: 172 FEGGIPYEVFSLPNLRVLWAPRGNFGGQLPSNWTESCSLRVLNLAQNKFNGLLHKSM 2
           F GGIP  +  LP+L+VLWAPRGNF G+LP+NW   CSL+VLNL QN   G + +S+
Sbjct: 298 FNGGIPSGLLLLPSLQVLWAPRGNFNGRLPTNWNSLCSLKVLNLGQNYITGTIPESI 354


>ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like, partial [Glycine max]
          Length = 1022

 Score =  144 bits (362), Expect = 1e-32
 Identities = 74/118 (62%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
 Frame = -2

Query: 352 EIGRLLKLRVLDVSRNSLTDEIPKELGNCLKLSVLVLTNLVDFSEDDESSVGI-FRGEFN 176
           EIG +++LRVLDVSRNSLT  +PKEL NC+KLSVLVLT+L  F + DE  +   FRGEFN
Sbjct: 213 EIGHIVELRVLDVSRNSLTGRVPKELANCVKLSVLVLTDL--FEDRDEGGLEDGFRGEFN 270

Query: 175 AFEGGIPYEVFSLPNLRVLWAPRGNFGGQLPSNWTESCSLRVLNLAQNKFNGLLHKSM 2
           AF G IP++V  L +LRVLWAPR N GG+LPS W++ CSLRVLNLAQN   G++ +S+
Sbjct: 271 AFVGNIPHQVLLLSSLRVLWAPRANLGGRLPSGWSDLCSLRVLNLAQNYVAGVVPESL 328


>ref|XP_002321080.1| predicted protein [Populus trichocarpa] gi|222861853|gb|EEE99395.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/120 (60%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 EIGRLLKLRVLDVSRNSLTDEIPKELGNCLKLSVLVLTNLVDFSEDDESSVGI---FRGE 182
           EIG++ +LRVLDVS NSLT  IPKELG C KLSVLVLTN  +F  D+  + G    FR E
Sbjct: 247 EIGQIPELRVLDVSTNSLTQTIPKELGYCRKLSVLVLTNSSNFVGDNGGTGGNLDGFRLE 306

Query: 181 FNAFEGGIPYEVFSLPNLRVLWAPRGNFGGQLPSNWTESCSLRVLNLAQNKFNGLLHKSM 2
           FNAFEGG+P EV  LP+L++LWAPR N  G+LP NW++SCSLRVL+L QN   G++ K +
Sbjct: 307 FNAFEGGVPQEVLMLPSLQILWAPRANLDGRLPDNWSDSCSLRVLHLGQNSLRGVVPKGL 366



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
 Frame = -2

Query: 349 IGRLLKLRVLDVSRNSLTDEIPKELGNCLKL-SVLV----LTNLVDFSEDDESSVGIFRG 185
           IG L  LR LD+ RN L+  +P ELGN   L SVL+    LT  +       SS+ +   
Sbjct: 561 IGNLRMLRRLDLRRNRLSGSLPNELGNLRFLRSVLLGMNNLTGEIPSEFGQLSSLTVLDL 620

Query: 184 EFNAFEGGIPYEVFSLPNLRVLWAPRGNFGGQLPSNWTESCSLRVLNLAQNKFNG 20
             NA  G IP  + S  NL ++     +  G +P  ++   SL VLN++ N  +G
Sbjct: 621 SHNAVTGSIPVSLTSAKNLEIVLLNNNDLSGAIPPPFSNISSLVVLNVSFNNLSG 675


Top