BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041728
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512787.1| pentatricopeptide repeat-containing protein,...   177   1e-42
ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containi...   173   2e-41
ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containi...   171   4e-41
ref|XP_003624556.1| Pentatricopeptide repeat-containing protein ...   170   1e-40
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226...   163   1e-38

>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  177 bits (448), Expect = 1e-42
 Identities = 84/131 (64%), Positives = 103/131 (78%)
 Frame = +2

Query: 2   GFDRDLYFQNCLMDFYFKYGEVCYGRKVFDKMRVRNVVSWTTVIAGYVVCKELDVARVLF 181
           GF +D +  N LMD YFK G++ Y RK+FDKM VR+VVSWTT +AG V C ELD AR  F
Sbjct: 160 GFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVVSWTTFVAGLVACGELDTARAAF 219

Query: 182 EEMPVRNVVSWTVIIDGRARNGRPQEAFDLFWRMQLENVKPNEFTLVSLLIACTELGSLK 361
           +EMP+RNVVSWT +I+G  +N RPQEAF+LF RMQL NV+PN FTLV LL ACTELGSL+
Sbjct: 220 DEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACTELGSLE 279

Query: 362 LGTWVHDFALK 394
           LG  +H++AL+
Sbjct: 280 LGRRIHEYALE 290


>ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Glycine max]
          Length = 474

 Score =  173 bits (438), Expect = 2e-41
 Identities = 87/131 (66%), Positives = 102/131 (77%)
 Frame = +2

Query: 2   GFDRDLYFQNCLMDFYFKYGEVCYGRKVFDKMRVRNVVSWTTVIAGYVVCKELDVARVLF 181
           GF  DLY QN +M+ YFK   V  G  VFDKM VRNV +WTTVIAG+V C +LD AR LF
Sbjct: 152 GFWGDLYVQNTMMNLYFKCENVDDGWNVFDKMCVRNVFAWTTVIAGFVACGKLDTARELF 211

Query: 182 EEMPVRNVVSWTVIIDGRARNGRPQEAFDLFWRMQLENVKPNEFTLVSLLIACTELGSLK 361
           E+MP +NVVSWT IIDG  ++ +P EAFDLF RMQ +NV+PNE+TLVSL+ ACTE+GSLK
Sbjct: 212 EQMPSKNVVSWTAIIDGYVKHKQPIEAFDLFERMQADNVRPNEYTLVSLVRACTEMGSLK 271

Query: 362 LGTWVHDFALK 394
           LG  VHDFALK
Sbjct: 272 LGRRVHDFALK 282


>ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Glycine max]
          Length = 483

 Score =  171 bits (434), Expect = 4e-41
 Identities = 87/132 (65%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   GFDRDLYFQNCLMDFYFKYGEVCYGRKVFDKMRVRNVVSWTTVIAGYVVCKELDVARVLF 181
           GF  DLY QN +M+ YFK   V  GRKVFDKMRVRNV +WTTVI+G V C +LD AR LF
Sbjct: 153 GFWGDLYVQNTMMNLYFKCENVDDGRKVFDKMRVRNVFAWTTVISGLVACGKLDTARELF 212

Query: 182 EEMPVRNVVSWTVIIDGRARNGRPQEAFDLFWRM-QLENVKPNEFTLVSLLIACTELGSL 358
           E+MP +NVVSWT +IDG  ++ +P EAF+LF RM Q++NV+PNE+TLVSL+ ACTE+GSL
Sbjct: 213 EQMPSKNVVSWTAMIDGYVKHKQPIEAFNLFERMQQVDNVRPNEYTLVSLVRACTEMGSL 272

Query: 359 KLGTWVHDFALK 394
           KLG  VHDFALK
Sbjct: 273 KLGRRVHDFALK 284


>ref|XP_003624556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499571|gb|AES80774.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 476

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/132 (65%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   GFDRDLYFQNCLMDFYFKYG-EVCYGRKVFDKMRVRNVVSWTTVIAGYVVCKELDVARVL 178
           GF  D+Y QN +M+ YFK G +V  G KVFDKMRVRNVVSWTTVIAG V C +LD AR +
Sbjct: 148 GFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGKLDTAREV 207

Query: 179 FEEMPVRNVVSWTVIIDGRARNGRPQEAFDLFWRMQLENVKPNEFTLVSLLIACTELGSL 358
           FE +P +NVVSWT +I+G  +N  P +AFDLF RM ++NV+PNEFTLVSL+ ACT+LGSL
Sbjct: 208 FERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGSL 267

Query: 359 KLGTWVHDFALK 394
           KLG  +HDFALK
Sbjct: 268 KLGRRMHDFALK 279



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/82 (34%), Positives = 42/82 (51%)
 Frame = +2

Query: 122 TTVIAGYVVCKELDVARVLFEEMPVRNVVSWTVIIDGRARNGRPQEAFDLFWRMQLENVK 301
           T ++  Y  C  LD A  +F  M VRN+ +W  ++     +G   E  DLF  M+   V 
Sbjct: 290 TALVDMYSKCGSLDAAVKVFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVV 349

Query: 302 PNEFTLVSLLIACTELGSLKLG 367
           P+  T V +L AC ++  L+LG
Sbjct: 350 PDAITFVGVLSACVQINDLELG 371


>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/131 (58%), Positives = 101/131 (77%)
 Frame = +2

Query: 2   GFDRDLYFQNCLMDFYFKYGEVCYGRKVFDKMRVRNVVSWTTVIAGYVVCKELDVARVLF 181
           GF  D++ QN L+DFYFK G   +  KVF+KMRVRNVVSWTTVI+G + C +L  AR +F
Sbjct: 155 GFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIF 214

Query: 182 EEMPVRNVVSWTVIIDGRARNGRPQEAFDLFWRMQLENVKPNEFTLVSLLIACTELGSLK 361
           +E+P +NVVSWT +I+G  RN +P+EA +LF RMQ EN+ PNE+T+VSL+ ACTE+G L 
Sbjct: 215 DEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILT 274

Query: 362 LGTWVHDFALK 394
           LG  +HD+A+K
Sbjct: 275 LGRGIHDYAIK 285



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/87 (39%), Positives = 53/87 (60%)
 Frame = +2

Query: 107  NVVSWTTVIAGYVVCKELDVARVLFEEMPVRNVVSWTVIIDGRARNGRPQEAFDLFWRMQ 286
            NV   T++I  Y  C  +++A+  F+ M  +NV SWT ++ G   +GR +EA D+F++M 
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 1446

Query: 287  LENVKPNEFTLVSLLIACTELGSLKLG 367
               VKPN  T VS+L AC+  G ++ G
Sbjct: 1447 RAGVKPNYITFVSVLAACSHAGLVEEG 1473



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/131 (31%), Positives = 67/131 (51%)
 Frame = +2

Query: 2    GFDRDLYFQNCLMDFYFKYGEVCYGRKVFDKMRVRNVVSWTTVIAGYVVCKELDVARVLF 181
            GF+ DL+  + L+D Y K G++   R +FD++ +RNVVSWT++I GYV  ++ D A +LF
Sbjct: 1172 GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 1231

Query: 182  EEMPVRNVVSWTVIIDGRARNGRPQEAFDLFWRMQLENVKPNEFTLVSLLIACTELGSLK 361
            ++     +   T + DG                    NV  +   +VS+L AC+ +    
Sbjct: 1232 KDF----LEEETEVEDG-------------------NNVPLDSVVMVSVLSACSRVSGKG 1268

Query: 362  LGTWVHDFALK 394
            +   VH F +K
Sbjct: 1269 ITEGVHGFVVK 1279