BLASTX nr result

ID: Cnidium21_contig00041720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041720
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]         119   3e-25
ref|XP_002283294.2| PREDICTED: glutamate receptor 2.7-like [Viti...   116   2e-24
ref|XP_002305094.1| glutamate-gated kainate-type ion channel rec...   116   2e-24
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...   115   4e-24
emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]   115   4e-24

>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/102 (59%), Positives = 77/102 (75%)
 Frame = +1

Query: 7   IGVPGRTVFQKFVKVEPGDDNSKYVNKYSGFCIDVFYEVKNILEKSYPLPYEFIPFHGSY 186
           IGVPGRT F+KFVKVE   + ++   KY+GFCID+F EV  ILEK+Y LPY+F  + GSY
Sbjct: 448 IGVPGRTSFEKFVKVETVAETNEM--KYTGFCIDLFKEVLKILEKNYTLPYDFEAYDGSY 505

Query: 187 DDLVLGLTDGSKKNFDAVVGDVTILANRSKNVEFTQPFAESG 312
            DLV  + +G    +DA+VGD+TILA R+K +EFTQPFAESG
Sbjct: 506 PDLVQQVING---RYDAIVGDITILAERTKYIEFTQPFAESG 544


>ref|XP_002283294.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 781

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/104 (57%), Positives = 77/104 (74%)
 Frame = +1

Query: 1   MRIGVPGRTVFQKFVKVEPGDDNSKYVNKYSGFCIDVFYEVKNILEKSYPLPYEFIPFHG 180
           ++IG+P +T F KFVKV+  +  +    +YSGFCID+F EV  ILE++Y LPYEF P  G
Sbjct: 401 LKIGIPAKTSFDKFVKVDEAEAEAD--KRYSGFCIDIFREVLKILEQNYSLPYEFHPVIG 458

Query: 181 SYDDLVLGLTDGSKKNFDAVVGDVTILANRSKNVEFTQPFAESG 312
           +YD+LV  + +   K +DAVVGDVTILANRSK VEFT P+AESG
Sbjct: 459 TYDELVDFVYN---KTYDAVVGDVTILANRSKKVEFTVPYAESG 499


>ref|XP_002305094.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848058|gb|EEE85605.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 784

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/104 (59%), Positives = 78/104 (75%)
 Frame = +1

Query: 1   MRIGVPGRTVFQKFVKVEPGDDNSKYVNKYSGFCIDVFYEVKNILEKSYPLPYEFIPFHG 180
           M IGVPGRT F+KFVKV     NS    +Y GFCI++F++V+ +L+  Y LPY+F PF+G
Sbjct: 308 MIIGVPGRTSFEKFVKVST---NSAGKKEYDGFCIELFHKVREVLK--YDLPYQFEPFNG 362

Query: 181 SYDDLVLGLTDGSKKNFDAVVGDVTILANRSKNVEFTQPFAESG 312
           +YDDLV  + +   K FDA+VGDVTILANRS  VEFTQP+AESG
Sbjct: 363 TYDDLVDHVYN---KTFDAIVGDVTILANRSDKVEFTQPYAESG 403


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/104 (56%), Positives = 77/104 (74%)
 Frame = +1

Query: 1   MRIGVPGRTVFQKFVKVEPGDDNSKYVNKYSGFCIDVFYEVKNILEKSYPLPYEFIPFHG 180
           ++IG+P  T F KFVKV+    + +   KY+GFCID+F EV  ILE++Y LPY+F P+ G
Sbjct: 459 LKIGIPANTSFDKFVKVDEAQIDPE--KKYTGFCIDIFREVIKILEQNYSLPYDFHPYDG 516

Query: 181 SYDDLVLGLTDGSKKNFDAVVGDVTILANRSKNVEFTQPFAESG 312
           +YD+LV  +     K +DAVVGD+TILANRS+ VEFTQPFAESG
Sbjct: 517 TYDELVDRV---YTKTYDAVVGDMTILANRSRIVEFTQPFAESG 557


>emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]
          Length = 916

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/104 (56%), Positives = 77/104 (74%)
 Frame = +1

Query: 1   MRIGVPGRTVFQKFVKVEPGDDNSKYVNKYSGFCIDVFYEVKNILEKSYPLPYEFIPFHG 180
           ++IG+P  T F KFVKV+    + +   KY+GFCID+F EV  ILE++Y LPY+F P+ G
Sbjct: 459 LKIGIPANTSFDKFVKVDEAQIDPE--KKYTGFCIDIFREVIKILEQNYSLPYDFHPYDG 516

Query: 181 SYDDLVLGLTDGSKKNFDAVVGDVTILANRSKNVEFTQPFAESG 312
           +YD+LV  +     K +DAVVGD+TILANRS+ VEFTQPFAESG
Sbjct: 517 TYDELVDRV---YTKTYDAVVGDMTILANRSRIVEFTQPFAESG 557


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