BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041699
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   186   2e-45
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   186   2e-45
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]   177   1e-42
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]   176   1e-42
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   173   1e-41

>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  186 bits (472), Expect = 2e-45
 Identities = 88/132 (66%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
 Frame = -1

Query: 395  RVFRYLKGTSDLGMLYKREGQESLLGYSDSDYAGDLDGRKSTSGYVFKVGSAAVAWSSKR 216
            RV RYLKGT++LG+ Y+R   + L+GY+DSDYAGD+DG++STSG+VF +   AV+WSS++
Sbjct: 1006 RVLRYLKGTTELGVFYRRGVDDELVGYTDSDYAGDMDGKRSTSGFVFMLSGGAVSWSSRK 1065

Query: 215  QPVVSLSTTEAEFIXXXXXXCQSVWMQRVLKTLGRKECKC-TIFCDNSSTIKLSKNPVMH 39
            Q VV+LSTTEAE++      CQSVWM+RVL  LG  +CKC T+FCDNSSTIKLSKNPV H
Sbjct: 1066 QHVVTLSTTEAEYVAAAGCACQSVWMRRVLNKLGYSQCKCVTMFCDNSSTIKLSKNPVFH 1125

Query: 38   GRSKHIDVRFHF 3
            GRSKHIDVRFHF
Sbjct: 1126 GRSKHIDVRFHF 1137


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/132 (68%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
 Frame = -1

Query: 395  RVFRYLKGTSDLGMLYKREGQESLLGYSDSDYAGDLDGRKSTSGYVFKVGSAAVAWSSKR 216
            RV RYLKGT DLG+LY++EG   L+ Y+DSDYAGD+D RKSTSGYVF +    V+WSSK+
Sbjct: 859  RVLRYLKGTVDLGILYQKEGNGELIAYTDSDYAGDVDDRKSTSGYVFLLSEGVVSWSSKK 918

Query: 215  QPVVSLSTTEAEFIXXXXXXCQSVWMQRVLKTLGRKECKC-TIFCDNSSTIKLSKNPVMH 39
            QPVV+LSTTEAEF+      CQ VWM+RVL+ L   + KC T+ CDNSSTIKLSKNPVMH
Sbjct: 919  QPVVTLSTTEAEFVAAASCACQGVWMRRVLEKLCHSQGKCTTVLCDNSSTIKLSKNPVMH 978

Query: 38   GRSKHIDVRFHF 3
            GRSKHIDVRFHF
Sbjct: 979  GRSKHIDVRFHF 990



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236  VAWSSKRQPVVSLSTTEAEFIXXXXXXCQSVWMQRVLKTLGRKECKCT-IFCDNSSTIKL 60
            ++W SK+Q  V+ S+TEAE+        + +W++ +LK LG      T ++CDN S I +
Sbjct: 2282 ISWRSKKQTFVARSSTEAEYRALADTTSELLWLRWLLKDLGVSTSSATPLYCDNQSAIHI 2341

Query: 59   SKNPVMHGRSKHIDVRFHF 3
            + N V H R+KHI +  HF
Sbjct: 2342 AHNDVFHERTKHIKIDCHF 2360


>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
          Length = 1021

 Score =  177 bits (448), Expect = 1e-42
 Identities = 88/132 (66%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
 Frame = -1

Query: 395  RVFRYLKGTSDLGMLYKREGQESLLGYSDSDYAGDLDGRKSTSGYVFKVGSAAVAWSSKR 216
            RV RYLKGT++ G+ YK+ G + L  Y+DSDYAGDL+ +KSTSGYVF + S AV+WSS++
Sbjct: 845  RVLRYLKGTTEFGIFYKKGGDDELAAYTDSDYAGDLEDKKSTSGYVFLLSSRAVSWSSRK 904

Query: 215  QPVVSLSTTEAEFIXXXXXXCQSVWMQRVLKTLGRKECK-CTIFCDNSSTIKLSKNPVMH 39
            QPVVSLSTTEAEFI      CQ+VW++RVL  L + + K  TI CDNSS IKLSKNPVMH
Sbjct: 905  QPVVSLSTTEAEFIAAASCACQAVWLKRVLGKLSQNQGKSTTIHCDNSSAIKLSKNPVMH 964

Query: 38   GRSKHIDVRFHF 3
            GRSKHIDVRFHF
Sbjct: 965  GRSKHIDVRFHF 976


>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
          Length = 1338

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/132 (65%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
 Frame = -1

Query: 395  RVFRYLKGTSDLGMLYKREGQESLLGYSDSDYAGDLDGRKSTSGYVFKVGSAAVAWSSKR 216
            R+ RYLKGT D G+ YK+ G E L+ Y+DSDYAGDLD RKSTSGYVF + S AV+WSSK+
Sbjct: 1157 RILRYLKGTIDFGVFYKKGGNEELIAYTDSDYAGDLDDRKSTSGYVFMLSSGAVSWSSKK 1216

Query: 215  QPVVSLSTTEAEFIXXXXXXCQSVWMQRVLKTLGR-KECKCTIFCDNSSTIKLSKNPVMH 39
            QPVVSLSTTEAEFI      CQ++W++R+L+ L   +    T++CDNSSTIKLSKN VMH
Sbjct: 1217 QPVVSLSTTEAEFIAATSCVCQAIWLRRILEGLNHAQHDSTTVYCDNSSTIKLSKNLVMH 1276

Query: 38   GRSKHIDVRFHF 3
            GR KHIDV FHF
Sbjct: 1277 GRCKHIDVHFHF 1288


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  173 bits (439), Expect = 1e-41
 Identities = 82/132 (62%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
 Frame = -1

Query: 395  RVFRYLKGTSDLGMLYKREGQESLLGYSDSDYAGDLDGRKSTSGYVFKVGSAAVAWSSKR 216
            R+ RY++GT DLG+ Y+R G   L+G+ DSDYAGD+D RKSTSGYVF +G  A+AW+SK+
Sbjct: 1155 RILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKK 1214

Query: 215  QPVVSLSTTEAEFIXXXXXXCQSVWMQRVLKTLG-RKECKCTIFCDNSSTIKLSKNPVMH 39
            QP+V+LSTTEAEF+      CQ+VW++ VL+ +G R+E    +FCDNSSTIKLSKNPV+H
Sbjct: 1215 QPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLH 1274

Query: 38   GRSKHIDVRFHF 3
            GRSKHI VR+HF
Sbjct: 1275 GRSKHIHVRYHF 1286