BLASTX nr result
ID: Cnidium21_contig00041679
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00041679 (530 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [... 89 4e-16 ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [M... 88 9e-16 gb|ABN05856.1| KH, type 1 [Medicago truncatula] 88 9e-16 ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g... 87 1e-15 emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera] 84 2e-14 >ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max] Length = 663 Score = 89.0 bits (219), Expect = 4e-16 Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 1/139 (0%) Frame = -3 Query: 414 HMYSAEEGRISVSRKYDPSKEVTFRLLCSHNVAXXXXXXXXXXVKSLEAEIGASIRISKP 235 H SAE R+S +EV+FR+LCS++ V++L++E GA+I I Sbjct: 290 HSLSAEVNRVSSLEPKALQQEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPL 349 Query: 234 VATHTERIVTITAWECPES-FSFAQNAVMRILSRYVEVDKAKEQGSSLVTERTITARLIV 58 VA +R++TI A E PES +S AQ A + + SR +EV KE S L T+T RL+V Sbjct: 350 VAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVTVRLVV 409 Query: 57 DSNQVSCLIDTKGMISSDI 1 S+QV CLI G+I S+I Sbjct: 410 PSSQVGCLIGKGGVIVSEI 428 >ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula] gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula] Length = 766 Score = 87.8 bits (216), Expect = 9e-16 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 1/139 (0%) Frame = -3 Query: 414 HMYSAEEGRISVSRKYDPSKEVTFRLLCSHNVAXXXXXXXXXXVKSLEAEIGASIRISKP 235 H SAE R+S +E+TF+++CS++ +++L++E GA++ + Sbjct: 310 HSLSAEVNRVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPS 369 Query: 234 VATHTERIVTITAWECPES-FSFAQNAVMRILSRYVEVDKAKEQGSSLVTERTITARLIV 58 VA +R++TITA E PES +S AQ A + + SR VE K S L T ++TA+L+V Sbjct: 370 VAECEDRLITITASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVV 429 Query: 57 DSNQVSCLIDTKGMISSDI 1 SNQV CL+ G+I S++ Sbjct: 430 SSNQVGCLLGKGGVIVSEM 448 >gb|ABN05856.1| KH, type 1 [Medicago truncatula] Length = 564 Score = 87.8 bits (216), Expect = 9e-16 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 1/139 (0%) Frame = -3 Query: 414 HMYSAEEGRISVSRKYDPSKEVTFRLLCSHNVAXXXXXXXXXXVKSLEAEIGASIRISKP 235 H SAE R+S +E+TF+++CS++ +++L++E GA++ + Sbjct: 108 HSLSAEVNRVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPS 167 Query: 234 VATHTERIVTITAWECPES-FSFAQNAVMRILSRYVEVDKAKEQGSSLVTERTITARLIV 58 VA +R++TITA E PES +S AQ A + + SR VE K S L T ++TA+L+V Sbjct: 168 VAECEDRLITITASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVV 227 Query: 57 DSNQVSCLIDTKGMISSDI 1 SNQV CL+ G+I S++ Sbjct: 228 SSNQVGCLLGKGGVIVSEM 246 >ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis vinifera] Length = 648 Score = 87.4 bits (215), Expect = 1e-15 Identities = 71/219 (32%), Positives = 105/219 (47%), Gaps = 46/219 (21%) Frame = -3 Query: 519 DELIQIMGKAVAVKQTLLAVAGRLQE------------------------------MKPR 430 DE+++I G +AVK+ L+AV+ RLQ+ + R Sbjct: 200 DEMVEIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQR 259 Query: 429 GIVLDHM-------------YSAEEGRISVSRKYDPSKEVTFRLLCSHNVAXXXXXXXXX 289 G VL + S RIS +EV F++LCS++ Sbjct: 260 GSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGT 319 Query: 288 XVKSLEAEIGASIRISKPVATHTERIVTITAWECPES-FSFAQNAVMRILSRYVE--VDK 118 VK+L+ E GASI + PVA ER++TITA E PES +S AQN V+ + +R +E ++K Sbjct: 320 IVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEK 379 Query: 117 AKEQGSSLVTERTITARLIVDSNQVSCLIDTKGMISSDI 1 + GS ++ARL+V SNQV CL+ G I S++ Sbjct: 380 GLDSGSK---GSPVSARLVVPSNQVGCLMGKGGTIISEM 415 >emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera] Length = 569 Score = 83.6 bits (205), Expect = 2e-14 Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 46/217 (21%) Frame = -3 Query: 513 LIQIMGKAVAVKQTLLAVAGRLQE------------------------------MKPRGI 424 ++QI G +AVK+ L+AV+ RLQ+ + RG Sbjct: 123 VLQIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGS 182 Query: 423 VLDHM-------------YSAEEGRISVSRKYDPSKEVTFRLLCSHNVAXXXXXXXXXXV 283 VL + S RIS +EV F++LCS++ V Sbjct: 183 VLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIV 242 Query: 282 KSLEAEIGASIRISKPVATHTERIVTITAWECPES-FSFAQNAVMRILSRYVE--VDKAK 112 K+L+ E GASI + PVA ER++TITA E PES +S AQN V+ + +R +E ++K Sbjct: 243 KALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGL 302 Query: 111 EQGSSLVTERTITARLIVDSNQVSCLIDTKGMISSDI 1 + GS ++ARL+V SNQV CL+ G I S++ Sbjct: 303 DSGSK---GSPVSARLVVPSNQVGCLMGKGGTIISEM 336