BLASTX nr result

ID: Cnidium21_contig00041654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041654
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   253   1e-65
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   217   1e-54
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   215   3e-54
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   211   7e-53
emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]   203   2e-50

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  253 bits (646), Expect = 1e-65
 Identities = 123/179 (68%), Positives = 151/179 (84%)
 Frame = -3

Query: 539  IARLLTDQLRKDSYGWNDEATIAFEQLKNIMVNPLVLTMPDFQQVFVLETDASGYGIGAV 360
            IAR LT+QL+KD++ W+  AT AF+QLK+ MV+  VL MP+FQ  FV+ETDASGYG+GAV
Sbjct: 941  IARPLTEQLKKDNFKWSATATEAFKQLKSAMVSAPVLAMPNFQLTFVVETDASGYGMGAV 1000

Query: 359  LMQSNRPIAYFSKLLGVRMQQKSIYEKELIAIYLAVQKWKYYLLGRHFVVRSDQQSLRFL 180
            LMQ NRPIAY+SKLLG R Q KS+YEKEL+AI  AVQKWKYYLLGRHFVVR+DQQSLR++
Sbjct: 1001 LMQDNRPIAYYSKLLGTRAQLKSVYEKELMAICFAVQKWKYYLLGRHFVVRTDQQSLRYI 1060

Query: 179  TQQREINSEYQKWVTKLLGFDFQIQFKPGISNRVADALSRKAVREVVLSTMISSNKVIW 3
            TQQREI +E+QKWV+KL+G+DF+I +KPG+SNRVADALSRK V EV L  +++   V W
Sbjct: 1061 TQQREIGAEFQKWVSKLMGYDFEIHYKPGLSNRVADALSRKTVGEVELGAIVAVQGVEW 1119


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  217 bits (552), Expect = 1e-54
 Identities = 109/175 (62%), Positives = 132/175 (75%)
 Frame = -3

Query: 539  IARLLTDQLRKDSYGWNDEATIAFEQLKNIMVNPLVLTMPDFQQVFVLETDASGYGIGAV 360
            IA  LT+QL+KDS+GW+  AT AFE LK  +    VL MP+F   FV+E DASGYG+GAV
Sbjct: 873  IAHPLTNQLKKDSFGWSPAATRAFETLKRALTEAPVLQMPNFSLPFVIEADASGYGLGAV 932

Query: 359  LMQSNRPIAYFSKLLGVRMQQKSIYEKELIAIYLAVQKWKYYLLGRHFVVRSDQQSLRFL 180
            L+Q   PIAYFSK LG R + KSIYEKEL+A+ +AVQKWK++LLGRHFV+ SDQQSLR L
Sbjct: 933  LLQQGHPIAYFSKTLGERARAKSIYEKELMAVVMAVQKWKHFLLGRHFVIHSDQQSLRHL 992

Query: 179  TQQREINSEYQKWVTKLLGFDFQIQFKPGISNRVADALSRKAVREVVLSTMISSN 15
              QREI   YQKWV KLLGFDF+I++KPG  N+VADALSRK   E   + + SS+
Sbjct: 993  LNQREIGPAYQKWVGKLLGFDFEIKYKPGGHNKVADALSRKHPPEAEYNLLTSSH 1047


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  215 bits (548), Expect = 3e-54
 Identities = 99/170 (58%), Positives = 134/170 (78%)
 Frame = -3

Query: 527  LTDQLRKDSYGWNDEATIAFEQLKNIMVNPLVLTMPDFQQVFVLETDASGYGIGAVLMQS 348
            LT +L+KD++ WN EA +AF++LK  M    VL +P+F Q+F++E DASGYG+G VLMQS
Sbjct: 1493 LTQELKKDAFNWNLEAEVAFQKLKTTMTTIPVLALPNFSQLFIVEMDASGYGLGTVLMQS 1552

Query: 347  NRPIAYFSKLLGVRMQQKSIYEKELIAIYLAVQKWKYYLLGRHFVVRSDQQSLRFLTQQR 168
            +RP+AYFS++L  R +QKSIYE+EL+AI LAVQKW++YLLGRHF+VR+DQ SL+FL +QR
Sbjct: 1553 HRPVAYFSQVLTARERQKSIYERELMAIVLAVQKWRHYLLGRHFIVRTDQSSLKFLLEQR 1612

Query: 167  EINSEYQKWVTKLLGFDFQIQFKPGISNRVADALSRKAVREVVLSTMISS 18
             +N  YQKWV KL G+DF+IQF+PG  N+ ADALSR  +   + + M+ S
Sbjct: 1613 IVNESYQKWVAKLFGYDFEIQFRPGXENKAADALSRIPISMELXALMVPS 1662


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  211 bits (536), Expect = 7e-53
 Identities = 103/179 (57%), Positives = 132/179 (73%)
 Frame = -3

Query: 539  IARLLTDQLRKDSYGWNDEATIAFEQLKNIMVNPLVLTMPDFQQVFVLETDASGYGIGAV 360
            IA  LT QL+KD++ W+ EAT AF+ LK  +    VL +P+F+  FV+E +ASGYG+G V
Sbjct: 709  IASPLTQQLKKDAFQWSKEATTAFQLLKEALTTAPVLALPNFELPFVIEANASGYGLGVV 768

Query: 359  LMQSNRPIAYFSKLLGVRMQQKSIYEKELIAIYLAVQKWKYYLLGRHFVVRSDQQSLRFL 180
            L+Q   PIAYFSK+LGVR + KSIYEKEL+A+ LAV KW++YLLGRHFV+ SDQQSL+ L
Sbjct: 769  LLQQGHPIAYFSKVLGVRARAKSIYEKELMAVVLAVLKWRHYLLGRHFVIHSDQQSLKHL 828

Query: 179  TQQREINSEYQKWVTKLLGFDFQIQFKPGISNRVADALSRKAVREVVLSTMISSNKVIW 3
              QREI  EYQKWV KL G+DF+I++K G SNRVAD LSR+       + MIS++   W
Sbjct: 829  LSQREIGPEYQKWVGKLFGYDFEIKYKTGASNRVADGLSRRGETVAEYNLMISTHHPQW 887


>emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]
          Length = 1258

 Score =  203 bits (516), Expect = 2e-50
 Identities = 94/170 (55%), Positives = 131/170 (77%)
 Frame = -3

Query: 527  LTDQLRKDSYGWNDEATIAFEQLKNIMVNPLVLTMPDFQQVFVLETDASGYGIGAVLMQS 348
            LT QL+KD++ W+ +A  AF +LK  M   LVL +P+F Q F++ETDAS YG+GAVLMQS
Sbjct: 739  LTQQLKKDAFNWSPKAEAAFRKLKTAMTTILVLALPNFSQPFIIETDASRYGLGAVLMQS 798

Query: 347  NRPIAYFSKLLGVRMQQKSIYEKELIAIYLAVQKWKYYLLGRHFVVRSDQQSLRFLTQQR 168
            +RP+AYF+++L  R +QK IY++EL+AI LA+QKW++YLLGRHF+V++DQ SL+FL +QR
Sbjct: 799  HRPVAYFNQVLSARERQKFIYKRELMAIGLAIQKWRHYLLGRHFIVQTDQSSLKFLLEQR 858

Query: 167  EINSEYQKWVTKLLGFDFQIQFKPGISNRVADALSRKAVREVVLSTMISS 18
             +N  YQKWV KL G+DF+IQF P + N+ ADALSR  +   + + M+ S
Sbjct: 859  VVNELYQKWVAKLFGYDFEIQFPPELKNKAADALSRIPISMDLATHMVPS 908


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