BLASTX nr result
ID: Cnidium21_contig00041644
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00041644 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi... 208 4e-52 ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containi... 206 2e-51 ref|XP_003610927.1| Pentatricopeptide repeat-containing protein ... 201 5e-50 ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2... 200 9e-50 emb|CBI25911.3| unnamed protein product [Vitis vinifera] 193 1e-47 >ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like [Glycine max] Length = 693 Score = 208 bits (529), Expect = 4e-52 Identities = 99/137 (72%), Positives = 115/137 (83%) Frame = +2 Query: 2 QNGQPHEALRLFELLLKSGNKPDHITFIGVLSACTHAGLVDKGLEYFHSIKEKHGLEYTE 181 QNGQP EAL FELLL+SG KPD +T++GVLSACTHAGLVDKGLEYFHSIKEKHGL +T Sbjct: 399 QNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTA 458 Query: 182 HHCGCVIDLLGRSGRFMEAEDFILSMPMKPSRVHWASLLNGCRIHRNIELAKRSAEACIQ 361 H CVIDLL RSGRF EAE+ I +MP+KP + WASLL GCRIH N+ELAKR+A+A + Sbjct: 459 DHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYE 518 Query: 362 IEPDNSATYLTLASIYA 412 IEP+N ATY+TLA+IYA Sbjct: 519 IEPENPATYITLANIYA 535 >ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like, partial [Vitis vinifera] Length = 621 Score = 206 bits (524), Expect = 2e-51 Identities = 99/137 (72%), Positives = 113/137 (82%) Frame = +2 Query: 2 QNGQPHEALRLFELLLKSGNKPDHITFIGVLSACTHAGLVDKGLEYFHSIKEKHGLEYTE 181 QNGQP EAL+ FELLLKSG +PDHITF+GVLSACTHAGLVDKGLEYF SIKEKHGL +T Sbjct: 401 QNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTA 460 Query: 182 HHCGCVIDLLGRSGRFMEAEDFILSMPMKPSRVHWASLLNGCRIHRNIELAKRSAEACIQ 361 H C+IDLL RSGR EAED I MP++P + WASLL GCRIH N++LAKR+AEA + Sbjct: 461 DHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFE 520 Query: 362 IEPDNSATYLTLASIYA 412 IEP+N ATY TLA+IYA Sbjct: 521 IEPENPATYTTLANIYA 537 >ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 802 Score = 201 bits (511), Expect = 5e-50 Identities = 96/137 (70%), Positives = 113/137 (82%) Frame = +2 Query: 2 QNGQPHEALRLFELLLKSGNKPDHITFIGVLSACTHAGLVDKGLEYFHSIKEKHGLEYTE 181 QNGQP AL+ FE LL+SG KPD ITF+GVLSACTHAGLVD GLEYFHS+KEKHGL +T Sbjct: 375 QNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTA 434 Query: 182 HHCGCVIDLLGRSGRFMEAEDFILSMPMKPSRVHWASLLNGCRIHRNIELAKRSAEACIQ 361 H CVIDLL RSGRF EAE+ I +MPMKP + WASLL GCRIH NIELA+R+A+A + Sbjct: 435 DHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFE 494 Query: 362 IEPDNSATYLTLASIYA 412 +EP+N ATY+TL++IYA Sbjct: 495 LEPENPATYITLSNIYA 511 >ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa] Length = 676 Score = 200 bits (509), Expect = 9e-50 Identities = 94/137 (68%), Positives = 114/137 (83%) Frame = +2 Query: 2 QNGQPHEALRLFELLLKSGNKPDHITFIGVLSACTHAGLVDKGLEYFHSIKEKHGLEYTE 181 QNGQP EA+R FELL+KSG +PDHITF+GVLSAC HAGLVDKGL+YFHSIKE++GL +T Sbjct: 382 QNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTA 441 Query: 182 HHCGCVIDLLGRSGRFMEAEDFILSMPMKPSRVHWASLLNGCRIHRNIELAKRSAEACIQ 361 H C+IDLL RSG+F EAE+ I M MKP + WASLL GCRIH N++LA+R+AEA + Sbjct: 442 DHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFE 501 Query: 362 IEPDNSATYLTLASIYA 412 IEP+N ATY+TLA+IYA Sbjct: 502 IEPENPATYVTLANIYA 518 >emb|CBI25911.3| unnamed protein product [Vitis vinifera] Length = 288 Score = 193 bits (491), Expect = 1e-47 Identities = 93/130 (71%), Positives = 107/130 (82%) Frame = +2 Query: 23 ALRLFELLLKSGNKPDHITFIGVLSACTHAGLVDKGLEYFHSIKEKHGLEYTEHHCGCVI 202 AL+ FELLLKSG +PDHITF+GVLSACTHAGLVDKGLEYF SIKEKHGL +T H C+I Sbjct: 1 ALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLI 60 Query: 203 DLLGRSGRFMEAEDFILSMPMKPSRVHWASLLNGCRIHRNIELAKRSAEACIQIEPDNSA 382 DLL RSGR EAED I MP++P + WASLL GCRIH N++LAKR+AEA +IEP+N A Sbjct: 61 DLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPA 120 Query: 383 TYLTLASIYA 412 TY TLA+IYA Sbjct: 121 TYTTLANIYA 130