BLASTX nr result

ID: Cnidium21_contig00041640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041640
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510601.1| tetracycline transporter, putative [Ricinus ...   211   4e-53
gb|ABK95031.1| unknown [Populus trichocarpa]                          204   5e-51
ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1...   204   6e-51
emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera]   204   6e-51
ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50

>ref|XP_002510601.1| tetracycline transporter, putative [Ricinus communis]
           gi|223551302|gb|EEF52788.1| tetracycline transporter,
           putative [Ricinus communis]
          Length = 442

 Score =  211 bits (538), Expect = 4e-53
 Identities = 98/139 (70%), Positives = 120/139 (86%)
 Frame = +3

Query: 3   LSHLFMTVFLYSFSIFMVVPAMTDVIMSAVCPGKDECSIAIYLTGVLHAVVGLGTLVMMP 182
           LSHLFMT+FL++FS FMV+PA+TDV MSA+CPG+DECS+AIYLTG   A++GLGTLVMMP
Sbjct: 7   LSHLFMTIFLHNFSTFMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAIIGLGTLVMMP 66

Query: 183 LIGNLSDTYGRKVMLTVPMVLAIFPSVILAYSRSPYFVYAYLLIKTVTSMLCEGSVFCIA 362
           L+GNLSD YGRK +LT+PM L + P   LAYSR+ YF YAY ++KT+T+M+CEGSV C+A
Sbjct: 67  LVGNLSDKYGRKALLTIPMSLTVIPLATLAYSRTTYFFYAYYVMKTLTAMVCEGSVHCLA 126

Query: 363 LAYVADNVAEKQRASAFGI 419
           LAYVADNV E +RASAFGI
Sbjct: 127 LAYVADNVPEARRASAFGI 145


>gb|ABK95031.1| unknown [Populus trichocarpa]
          Length = 450

 Score =  204 bits (520), Expect = 5e-51
 Identities = 97/139 (69%), Positives = 118/139 (84%)
 Frame = +3

Query: 3   LSHLFMTVFLYSFSIFMVVPAMTDVIMSAVCPGKDECSIAIYLTGVLHAVVGLGTLVMMP 182
           LSHLFMT+FL++FS FMV+PA+TDV MSA+CPG+DECS+AIYLTG   A++GLGTLV MP
Sbjct: 7   LSHLFMTIFLHNFSTFMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAIIGLGTLVTMP 66

Query: 183 LIGNLSDTYGRKVMLTVPMVLAIFPSVILAYSRSPYFVYAYLLIKTVTSMLCEGSVFCIA 362
           LIGN+SD YGRK +LTVPM L I PS ILAYSR+  F YAY +++T+ +M+CEGSV C+A
Sbjct: 67  LIGNMSDKYGRKALLTVPMSLIIVPSAILAYSRTRNFFYAYYVVRTLMAMVCEGSVQCLA 126

Query: 363 LAYVADNVAEKQRASAFGI 419
           LAYVADNV E +RAS FGI
Sbjct: 127 LAYVADNVPESRRASTFGI 145


>ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis
           vinifera] gi|302141709|emb|CBI18912.3| unnamed protein
           product [Vitis vinifera]
          Length = 442

 Score =  204 bits (519), Expect = 6e-51
 Identities = 95/139 (68%), Positives = 117/139 (84%)
 Frame = +3

Query: 3   LSHLFMTVFLYSFSIFMVVPAMTDVIMSAVCPGKDECSIAIYLTGVLHAVVGLGTLVMMP 182
           L HLFMTVFL++F+ FMV+PA+TDV M+A+CPG+DECSIAIYLTG    ++GLGTLVMMP
Sbjct: 7   LRHLFMTVFLFNFATFMVIPAITDVTMAALCPGRDECSIAIYLTGFQQVIIGLGTLVMMP 66

Query: 183 LIGNLSDTYGRKVMLTVPMVLAIFPSVILAYSRSPYFVYAYLLIKTVTSMLCEGSVFCIA 362
           L+GNLSD YGRK +LT+PM L I P  ILA+SRS  F YAY ++KT+TSM+CEGSV C+ 
Sbjct: 67  LVGNLSDMYGRKALLTIPMCLTIIPLAILAWSRSRNFFYAYFVLKTLTSMVCEGSVHCLT 126

Query: 363 LAYVADNVAEKQRASAFGI 419
           LAYVADN+ E +RASAFG+
Sbjct: 127 LAYVADNIPEIRRASAFGV 145


>emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera]
          Length = 408

 Score =  204 bits (519), Expect = 6e-51
 Identities = 95/139 (68%), Positives = 117/139 (84%)
 Frame = +3

Query: 3   LSHLFMTVFLYSFSIFMVVPAMTDVIMSAVCPGKDECSIAIYLTGVLHAVVGLGTLVMMP 182
           L HLFMTVFL++F+ FMV+PA+TDV M+A+CPG+DECSIAIYLTG    ++GLGTLVMMP
Sbjct: 7   LRHLFMTVFLFNFATFMVIPAITDVTMAALCPGRDECSIAIYLTGFQQVIIGLGTLVMMP 66

Query: 183 LIGNLSDTYGRKVMLTVPMVLAIFPSVILAYSRSPYFVYAYLLIKTVTSMLCEGSVFCIA 362
           L+GNLSD YGRK +LT+PM L I P  ILA+SRS  F YAY ++KT+TSM+CEGSV C+ 
Sbjct: 67  LVGNLSDMYGRKALLTIPMCLTIIPLAILAWSRSRNFFYAYFVLKTLTSMVCEGSVHCLT 126

Query: 363 LAYVADNVAEKQRASAFGI 419
           LAYVADN+ E +RASAFG+
Sbjct: 127 LAYVADNIPEIRRASAFGV 145


>ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/139 (69%), Positives = 119/139 (85%)
 Frame = +3

Query: 3   LSHLFMTVFLYSFSIFMVVPAMTDVIMSAVCPGKDECSIAIYLTGVLHAVVGLGTLVMMP 182
           LSHLF+T+FL++FS  MV+PA+TDV MSA+CPG+DECS+AIYLTG   A++GLGTLVMMP
Sbjct: 7   LSHLFITIFLHNFSAVMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAIIGLGTLVMMP 66

Query: 183 LIGNLSDTYGRKVMLTVPMVLAIFPSVILAYSRSPYFVYAYLLIKTVTSMLCEGSVFCIA 362
           LIGN+SD YGRK +LTVP+ L I PS ILAYSR+  F YAY ++KT+ +M+CEGSV C+A
Sbjct: 67  LIGNMSDKYGRKALLTVPLSLVIVPSAILAYSRTRNFFYAYYVVKTLIAMVCEGSVPCLA 126

Query: 363 LAYVADNVAEKQRASAFGI 419
           LAYVADNV E +RASAFGI
Sbjct: 127 LAYVADNVPEGRRASAFGI 145


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