BLASTX nr result

ID: Cnidium21_contig00041628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041628
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera]    69   4e-10
ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange f...    69   5e-10

>emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera]
          Length = 640

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
 Frame = -2

Query: 518 HMDTVYTYKQERQRSYLSSVKPTSSNLSKPFSVV-TLWVAKSLKNLGSKGKDLNGFK--- 351
           H  T       R    L SVKP SSN S  F V+   WV+K L+NL  +G+  NGF    
Sbjct: 8   HQRTEVPQLPRRHALCLPSVKPKSSNKSTAFLVLGRFWVSKYLRNLCCRGQFSNGFCVRR 67

Query: 350 ---SNVVVNNSVYCASPYCLE-EYNMEGFVEKSQVLDEKKDGF 234
              S +VVNNSV+C SP  +E    MEGF+EK + ++E+++GF
Sbjct: 68  IRFSGMVVNNSVFCDSPGFVEGAXEMEGFIEKGEKVEERENGF 110


>ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
           vinifera]
          Length = 701

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
 Frame = -2

Query: 518 HMDTVYTYKQERQRSYLSSVKPTSSNLSKPFSVV-TLWVAKSLKNLGSKGKDLNGFK--- 351
           H  T       R    L SVKP SSN S  F V+   WV+K L+NL  +G+  NGF    
Sbjct: 8   HQRTEVPQLPRRHALCLPSVKPKSSNKSTAFLVLGRFWVSKYLRNLCCRGQFSNGFCVRR 67

Query: 350 ---SNVVVNNSVYCASPYCLE-EYNMEGFVEKSQVLDEKKDGF 234
              S +VVNNSV+C SP  +E    MEGF+EK + ++E+++GF
Sbjct: 68  IRFSGMVVNNSVFCDSPGFVEGATEMEGFIEKGEKVEERENGF 110


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