BLASTX nr result

ID: Cnidium21_contig00041602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041602
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...   171   6e-41
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...   171   6e-41
ref|NP_189621.1| General transcription factor 2-related zinc fin...   171   6e-41
emb|CAH65861.1| OSIGBa0126J24.6 [Oryza sativa Indica Group]           170   1e-40

>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score =  173 bits (439), Expect = 1e-41
 Identities = 82/138 (59%), Positives = 104/138 (75%)
 Frame = -2

Query: 417 SLKMNIESLLSQFGLSMSSIRGHGYDGASNMQGEFNGLKTLVMNENQSAYYVHCFAHQLQ 238
           SLK  IE+L S+ GLS+S +RG GYDGASNM+GEFNGLK L++N N SAYYVHCFAH+LQ
Sbjct: 328 SLKAAIEALFSKHGLSISRLRGQGYDGASNMRGEFNGLKALILNSNPSAYYVHCFAHRLQ 387

Query: 237 LALVSVAEGHPKVSKFFDVVSMVANIVGASCKRKDMLREKAHEQVVAALEEGLILSGQGK 58
           L LV+V + H +V   F+ +S + NIVGASCKR +++REK + +++  LE G I SG+G 
Sbjct: 388 LTLVAVTKKHNEVGDVFNFISSIINIVGASCKRMEVIREKQYARIIEGLENGEISSGRGL 447

Query: 57  NQHVSLNRAAATRWGSHY 4
           NQ  SL R   TRWGSHY
Sbjct: 448 NQETSLRRYGDTRWGSHY 465


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/140 (56%), Positives = 108/140 (77%)
 Frame = -2

Query: 420 LSLKMNIESLLSQFGLSMSSIRGHGYDGASNMQGEFNGLKTLVMNENQSAYYVHCFAHQL 241
           LSLK  I+SL +++GLS+  +RG GYDGASNM+GEFNGL++L++ E+ SAYYVHCFAHQL
Sbjct: 351 LSLKSAIDSLFAKYGLSLKKLRGQGYDGASNMKGEFNGLRSLILKESSSAYYVHCFAHQL 410

Query: 240 QLALVSVAEGHPKVSKFFDVVSMVANIVGASCKRKDMLREKAHEQVVAALEEGLILSGQG 61
           QL +++VA+ H +V +FF ++S++ N+VGASCKRKD +RE   ++V   +  G I +G G
Sbjct: 411 QLVVMAVAKKHVEVGEFFYMISVLLNVVGASCKRKDKIREIHRQKVEEKISNGEIKTGTG 470

Query: 60  KNQHVSLNRAAATRWGSHYK 1
            NQ +SL R   TRWGSHYK
Sbjct: 471 LNQELSLQRPGNTRWGSHYK 490


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/140 (56%), Positives = 108/140 (77%)
 Frame = -2

Query: 420 LSLKMNIESLLSQFGLSMSSIRGHGYDGASNMQGEFNGLKTLVMNENQSAYYVHCFAHQL 241
           LSLK  I+SL +++GLS+  +RG GYDGASNM+GEFNGL++L++ E+ SAYYVHCFAHQL
Sbjct: 309 LSLKSAIDSLFAKYGLSLKKLRGQGYDGASNMKGEFNGLRSLILKESSSAYYVHCFAHQL 368

Query: 240 QLALVSVAEGHPKVSKFFDVVSMVANIVGASCKRKDMLREKAHEQVVAALEEGLILSGQG 61
           QL +++VA+ H +V +FF ++S++ N+VGASCKRKD +RE   ++V   +  G I +G G
Sbjct: 369 QLVVMAVAKKHVEVGEFFYMISVLLNVVGASCKRKDKIREIHRQKVEEKISNGEIKTGTG 428

Query: 60  KNQHVSLNRAAATRWGSHYK 1
            NQ +SL R   TRWGSHYK
Sbjct: 429 LNQELSLQRPGNTRWGSHYK 448


>ref|NP_189621.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332644086|gb|AEE77607.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 536

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/140 (56%), Positives = 108/140 (77%)
 Frame = -2

Query: 420 LSLKMNIESLLSQFGLSMSSIRGHGYDGASNMQGEFNGLKTLVMNENQSAYYVHCFAHQL 241
           LSLK  I+SL +++GLS+  +RG GYDGASNM+G+FNGL++L++ EN SAYYVHCFAHQL
Sbjct: 76  LSLKSAIDSLFAKYGLSLKKLRGKGYDGASNMKGKFNGLRSLILKENSSAYYVHCFAHQL 135

Query: 240 QLALVSVAEGHPKVSKFFDVVSMVANIVGASCKRKDMLREKAHEQVVAALEEGLILSGQG 61
           QL +++VA+ H +V +FF ++S++ N+VGASCKRKD +RE   ++V   +  G I +G G
Sbjct: 136 QLVVMAVAKKHVEVGEFFYMISVLLNVVGASCKRKDKIREIDRQKVEEKISNGEIKTGTG 195

Query: 60  KNQHVSLNRAAATRWGSHYK 1
            NQ +SL R   TRWGSHYK
Sbjct: 196 LNQELSLQRPGNTRWGSHYK 215


>emb|CAH65861.1| OSIGBa0126J24.6 [Oryza sativa Indica Group]
          Length = 793

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/139 (61%), Positives = 105/139 (75%)
 Frame = -2

Query: 417 SLKMNIESLLSQFGLSMSSIRGHGYDGASNMQGEFNGLKTLVMNENQSAYYVHCFAHQLQ 238
           SLK  IESLL++ GL+M+ IRG GYDGASNM+GE  GLKTLVM E+ SAYYVHCFAHQLQ
Sbjct: 379 SLKEAIESLLTRHGLTMTQIRGQGYDGASNMKGEIKGLKTLVMKESPSAYYVHCFAHQLQ 438

Query: 237 LALVSVAEGHPKVSKFFDVVSMVANIVGASCKRKDMLREKAHEQVVAALEEGLILSGQGK 58
           L LV+VA+ +     F+D VS++ NIVG+SCKR  MLR + +E V+ ALE G++ SG G 
Sbjct: 439 LVLVAVAKENGDCVWFYDRVSLLLNIVGSSCKRHGMLRHQQYENVMKALECGILESGSGL 498

Query: 57  NQHVSLNRAAATRWGSHYK 1
           NQ + L R   TRWGSHYK
Sbjct: 499 NQEMGLPRPGDTRWGSHYK 517


Top