BLASTX nr result

ID: Cnidium21_contig00041597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041597
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263670.2| PREDICTED: malate dehydrogenase, glyoxysomal...   183   2e-44
ref|XP_002531998.1| malate dehydrogenase, putative [Ricinus comm...   182   5e-44
ref|XP_002310874.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44
pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysom...   181   1e-43
pdb|1SMK|A Chain A, Mature And Translocatable Forms Of Glyoxysom...   181   1e-43

>ref|XP_002263670.2| PREDICTED: malate dehydrogenase, glyoxysomal [Vitis vinifera]
           gi|297739396|emb|CBI29427.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score =  183 bits (465), Expect = 2e-44
 Identities = 91/108 (84%), Positives = 100/108 (92%)
 Frame = +3

Query: 3   RIQNCGTEVVEAKAGTGSATLSMAYAAVKFAESCLRGLRGDAGVVQCSFVASQVTELPFF 182
           RIQN GTEVVEAKAG GSATLSMAYAAVKFA++CLRGLRGDAGV+QC++V SQVTELPFF
Sbjct: 249 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLRGLRGDAGVIQCAYVFSQVTELPFF 308

Query: 183 ASKVRLGRNGVEEIYPLGPLNIYERAGLDKAKKELAASISKGVAFARK 326
           ASKVRLGR G EEIYPLGPLN YERAGL+KAKKELA+SI KG++F RK
Sbjct: 309 ASKVRLGRTGAEEIYPLGPLNEYERAGLEKAKKELASSIQKGISFIRK 356


>ref|XP_002531998.1| malate dehydrogenase, putative [Ricinus communis]
           gi|223528357|gb|EEF30397.1| malate dehydrogenase,
           putative [Ricinus communis]
          Length = 332

 Score =  182 bits (461), Expect = 5e-44
 Identities = 89/108 (82%), Positives = 100/108 (92%)
 Frame = +3

Query: 3   RIQNCGTEVVEAKAGTGSATLSMAYAAVKFAESCLRGLRGDAGVVQCSFVASQVTELPFF 182
           RIQN GTEVVEAKAGTGSATLSMAYAAVKFA++CLRG+RGDAGV+QC++VAS+VTELPFF
Sbjct: 225 RIQNGGTEVVEAKAGTGSATLSMAYAAVKFADACLRGMRGDAGVIQCAYVASEVTELPFF 284

Query: 183 ASKVRLGRNGVEEIYPLGPLNIYERAGLDKAKKELAASISKGVAFARK 326
           ASKVRLGR G+EEI+PLGPLN YER GL+KAK EL ASI KGV+F RK
Sbjct: 285 ASKVRLGRTGIEEIFPLGPLNEYERTGLEKAKTELGASIQKGVSFVRK 332


>ref|XP_002310874.1| predicted protein [Populus trichocarpa] gi|222853777|gb|EEE91324.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  181 bits (460), Expect = 6e-44
 Identities = 91/108 (84%), Positives = 99/108 (91%)
 Frame = +3

Query: 3   RIQNCGTEVVEAKAGTGSATLSMAYAAVKFAESCLRGLRGDAGVVQCSFVASQVTELPFF 182
           RIQN GTEVVEAKAG GSATLSMAYAAVKFA++CLR LRGDA VV C++VAS+VTELPFF
Sbjct: 247 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRALRGDAAVVHCAYVASEVTELPFF 306

Query: 183 ASKVRLGRNGVEEIYPLGPLNIYERAGLDKAKKELAASISKGVAFARK 326
           ASKVRLGRNGVEEIYPLGPLN YERAGL+KAKKELA SI KGV+F +K
Sbjct: 307 ASKVRLGRNGVEEIYPLGPLNDYERAGLEKAKKELAGSIQKGVSFVKK 354


>pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate
           Dehydrogenase Have Different Activities And Stabilities
           But Similar Crystal Structures gi|60593476|pdb|1SEV|B
           Chain B, Mature And Translocatable Forms Of Glyoxysomal
           Malate Dehydrogenase Have Different Activities And
           Stabilities But Similar Crystal Structures
          Length = 362

 Score =  181 bits (458), Expect = 1e-43
 Identities = 89/107 (83%), Positives = 99/107 (92%)
 Frame = +3

Query: 3   RIQNCGTEVVEAKAGTGSATLSMAYAAVKFAESCLRGLRGDAGVVQCSFVASQVTELPFF 182
           RIQN GTEVVEAKAG GSATLSMAYAAVKFA++CLRGLRGDAGV++C+FV+SQVTELPFF
Sbjct: 249 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFF 308

Query: 183 ASKVRLGRNGVEEIYPLGPLNIYERAGLDKAKKELAASISKGVAFAR 323
           ASKVRLGRNG+EE+Y LGPLN YER GL+KAKKELA SI KGV+F R
Sbjct: 309 ASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355


>pdb|1SMK|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate
           Dehydrogenase Have Different Activities And Stabilities
           But Similar Crystal Structures gi|60593488|pdb|1SMK|B
           Chain B, Mature And Translocatable Forms Of Glyoxysomal
           Malate Dehydrogenase Have Different Activities And
           Stabilities But Similar Crystal Structures
           gi|60593489|pdb|1SMK|C Chain C, Mature And
           Translocatable Forms Of Glyoxysomal Malate Dehydrogenase
           Have Different Activities And Stabilities But Similar
           Crystal Structures gi|60593490|pdb|1SMK|D Chain D,
           Mature And Translocatable Forms Of Glyoxysomal Malate
           Dehydrogenase Have Different Activities And Stabilities
           But Similar Crystal Structures gi|60593491|pdb|1SMK|E
           Chain E, Mature And Translocatable Forms Of Glyoxysomal
           Malate Dehydrogenase Have Different Activities And
           Stabilities But Similar Crystal Structures
           gi|60593492|pdb|1SMK|F Chain F, Mature And
           Translocatable Forms Of Glyoxysomal Malate Dehydrogenase
           Have Different Activities And Stabilities But Similar
           Crystal Structures gi|60593493|pdb|1SMK|G Chain G,
           Mature And Translocatable Forms Of Glyoxysomal Malate
           Dehydrogenase Have Different Activities And Stabilities
           But Similar Crystal Structures gi|60593494|pdb|1SMK|H
           Chain H, Mature And Translocatable Forms Of Glyoxysomal
           Malate Dehydrogenase Have Different Activities And
           Stabilities But Similar Crystal Structures
          Length = 326

 Score =  181 bits (458), Expect = 1e-43
 Identities = 89/107 (83%), Positives = 99/107 (92%)
 Frame = +3

Query: 3   RIQNCGTEVVEAKAGTGSATLSMAYAAVKFAESCLRGLRGDAGVVQCSFVASQVTELPFF 182
           RIQN GTEVVEAKAG GSATLSMAYAAVKFA++CLRGLRGDAGV++C+FV+SQVTELPFF
Sbjct: 213 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFF 272

Query: 183 ASKVRLGRNGVEEIYPLGPLNIYERAGLDKAKKELAASISKGVAFAR 323
           ASKVRLGRNG+EE+Y LGPLN YER GL+KAKKELA SI KGV+F R
Sbjct: 273 ASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 319


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