BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041594
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...    96   2e-18
dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   6e-14
dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]     80   1e-13
ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transc...    80   2e-13
gb|ACF22789.1| transcription factor related protein [Brachypodiu...    80   2e-13

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
 Frame = +1

Query: 4   ALLNLTQD--KGESYIFEFDSFPDRDACRDFVXXXXXXXXXXXXXXSEKSTVPPSSEQLS 177
           ALLNLTQD  KG  YIFEF+++PDR+ CR+FV              SE+S V    EQLS
Sbjct: 65  ALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQLS 124

Query: 178 TAEMDRRIKLLQVDSELQKLHKEFVMGG 261
           T EM+RRIKLL+ DSELQKLHK+FV+ G
Sbjct: 125 TIEMERRIKLLREDSELQKLHKQFVLSG 152


>dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 48/91 (52%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
 Frame = +1

Query: 4   ALLNLTQD--KGESYIFEFDSFPDRDACRDFVXXXXXXXXXXXXXXS----EKSTVPPSS 165
           ALLNL++D  KG  YIFEFD+  +RD CRDFV                   E S V    
Sbjct: 62  ALLNLSKDSDKGGGYIFEFDNVGNRDLCRDFVARVLGKYQGTVPARPNVPPELSAVSTGP 121

Query: 166 EQLSTAEMDRRIKLLQVDSELQKLHKEFVMG 258
           EQLS+AEM+RR+KLL+ DSELQKLHK+FV+G
Sbjct: 122 EQLSSAEMERRMKLLREDSELQKLHKKFVLG 152


>dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/90 (52%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
 Frame = +1

Query: 7   LLNLTQ--DKGESYIFEFDSFPDRDACRDFVXXXXXXXXXXXXXXS----EKSTVPPSSE 168
           LLNL++  DKG  YIFEFD+  +RD CRDFV                   EK  V    E
Sbjct: 67  LLNLSKVSDKGGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPARPNVPPEKLAVSTGPE 126

Query: 169 QLSTAEMDRRIKLLQVDSELQKLHKEFVMG 258
           QLS+AEM+RR+KLL+ DSELQKLHK+FV+G
Sbjct: 127 QLSSAEMERRMKLLREDSELQKLHKKFVLG 156


>ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Brachypodium distachyon]
          Length = 602

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
 Frame = +1

Query: 7   LLNLTQD--KGESYIFEFDSFPDRDACRDFVXXXXXXXXXXXXXXS----EKSTVPPSSE 168
           LLNL++D  KG  Y+FEFD+  +RD CRDFV                   EKS      E
Sbjct: 67  LLNLSKDSDKGGGYMFEFDNVGNRDLCRDFVARVLGKHQGIVPPRPNAPPEKSVAAAGPE 126

Query: 169 QLSTAEMDRRIKLLQVDSELQKLHKEFVMG 258
           QLS+AEM+RR+KLL+ DSELQKLHK+FV+G
Sbjct: 127 QLSSAEMERRMKLLREDSELQKLHKKFVLG 156


>gb|ACF22789.1| transcription factor related protein [Brachypodium distachyon]
          Length = 576

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
 Frame = +1

Query: 7   LLNLTQD--KGESYIFEFDSFPDRDACRDFVXXXXXXXXXXXXXXS----EKSTVPPSSE 168
           LLNL++D  KG  Y+FEFD+  +RD CRDFV                   EKS      E
Sbjct: 67  LLNLSKDSDKGGGYMFEFDNVGNRDLCRDFVARVLGKHQGIVPPRPNAPPEKSVAAAGPE 126

Query: 169 QLSTAEMDRRIKLLQVDSELQKLHKEFVMG 258
           QLS+AEM+RR+KLL+ DSELQKLHK+FV+G
Sbjct: 127 QLSSAEMERRMKLLREDSELQKLHKKFVLG 156