BLASTX nr result

ID: Cnidium21_contig00041588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041588
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]    117   1e-31
gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]    104   2e-27
emb|CAN72315.1| hypothetical protein VITISV_037426 [Vitis vinifera]    70   2e-10
emb|CAN69415.1| hypothetical protein VITISV_026852 [Vitis vinifera]    69   4e-10
emb|CAN64587.1| hypothetical protein VITISV_032880 [Vitis vinifera]    69   5e-10

>gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 321

 Score =  117 bits (293), Expect(2) = 1e-31
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = -1

Query: 322 LKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVCAL 143
           L+D CYPTR++ PSCI LP VNG NFE++ H INMLPKF G+E ED Y+FI +FEEVC +
Sbjct: 7   LQDMCYPTRNAIPSCIRLPEVNGANFELRPHFINMLPKFLGNETEDAYIFISEFEEVCIM 66

Query: 142 QKIQQLTEDSIRLRLINFALKEDAK 68
            K+++LTED+I+LR I FALK+ AK
Sbjct: 67  IKMRELTEDAIKLRFIPFALKDKAK 91



 Score = 43.9 bits (102), Expect(2) = 1e-31
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -3

Query: 68  KWLYSLPVNSISTWEGFVVIFL 3
           KWLYSLP NSISTWE FV +FL
Sbjct: 92  KWLYSLPTNSISTWEEFVTVFL 113


>gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 279

 Score =  104 bits (260), Expect(2) = 2e-27
 Identities = 47/85 (55%), Positives = 65/85 (76%)
 Frame = -1

Query: 322 LKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVCAL 143
           L D CYP R++ PSCI LP  NG +FE++  +INMLPKF G++ ED Y+FI +FEEVC +
Sbjct: 9   LHDMCYPIRNAIPSCIRLPETNGISFELRPQYINMLPKFLGNKTEDAYIFISEFEEVCIM 68

Query: 142 QKIQQLTEDSIRLRLINFALKEDAK 68
            K+++L ED+++LR I FALK+ AK
Sbjct: 69  IKMRELNEDAVKLRFIPFALKDKAK 93



 Score = 42.7 bits (99), Expect(2) = 2e-27
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 68  KWLYSLPVNSISTWEGFVVIFL 3
           KWLYSLP NSISTW+ FV +FL
Sbjct: 94  KWLYSLPTNSISTWDEFVTVFL 115


>emb|CAN72315.1| hypothetical protein VITISV_037426 [Vitis vinifera]
          Length = 635

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/87 (42%), Positives = 54/87 (62%)
 Frame = -1

Query: 328 VALKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVC 149
           ++++DR YP R S PSCI +PP+      I+ H + +LP F G E E+PY  I +FEEVC
Sbjct: 22  LSMRDRMYPPRMSSPSCI-VPPLE--QLIIRPHIVPLLPNFHGMESENPYAHIKEFEEVC 78

Query: 148 ALQKIQQLTEDSIRLRLINFALKEDAK 68
              +    + D +RL+L  F LK++AK
Sbjct: 79  NTFREGGASIDLMRLKLFPFTLKDEAK 105


>emb|CAN69415.1| hypothetical protein VITISV_026852 [Vitis vinifera]
          Length = 1073

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/87 (42%), Positives = 54/87 (62%)
 Frame = -1

Query: 328 VALKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVC 149
           ++++DR +P R S PSCI LPP+      I+ H + +LP F G E E+PY  I +FEEVC
Sbjct: 219 LSMRDRMHPPRMSAPSCI-LPPLE--QLVIRPHIVPLLPNFHGMESENPYAHIKEFEEVC 275

Query: 148 ALQKIQQLTEDSIRLRLINFALKEDAK 68
              +    + D +RL+L +F LK+ AK
Sbjct: 276 NTFREGGASIDLMRLKLFSFTLKDKAK 302


>emb|CAN64587.1| hypothetical protein VITISV_032880 [Vitis vinifera]
          Length = 261

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/87 (43%), Positives = 54/87 (62%)
 Frame = -1

Query: 328 VALKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVC 149
           ++++DR +P R S PSCI LPP+      I+ H + +LP F G E E+PY  I +FEEVC
Sbjct: 106 LSMRDRMHPPRMSAPSCI-LPPLE--QLVIRPHIVPLLPTFHGMESENPYSHIKEFEEVC 162

Query: 148 ALQKIQQLTEDSIRLRLINFALKEDAK 68
              +    + D +RL+L  FALK+ AK
Sbjct: 163 NTFREGVASIDLMRLKLFPFALKDKAK 189


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