BLASTX nr result
ID: Cnidium21_contig00041588
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00041588 (331 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis] 117 1e-31 gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis] 104 2e-27 emb|CAN72315.1| hypothetical protein VITISV_037426 [Vitis vinifera] 70 2e-10 emb|CAN69415.1| hypothetical protein VITISV_026852 [Vitis vinifera] 69 4e-10 emb|CAN64587.1| hypothetical protein VITISV_032880 [Vitis vinifera] 69 5e-10 >gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis] Length = 321 Score = 117 bits (293), Expect(2) = 1e-31 Identities = 54/85 (63%), Positives = 69/85 (81%) Frame = -1 Query: 322 LKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVCAL 143 L+D CYPTR++ PSCI LP VNG NFE++ H INMLPKF G+E ED Y+FI +FEEVC + Sbjct: 7 LQDMCYPTRNAIPSCIRLPEVNGANFELRPHFINMLPKFLGNETEDAYIFISEFEEVCIM 66 Query: 142 QKIQQLTEDSIRLRLINFALKEDAK 68 K+++LTED+I+LR I FALK+ AK Sbjct: 67 IKMRELTEDAIKLRFIPFALKDKAK 91 Score = 43.9 bits (102), Expect(2) = 1e-31 Identities = 18/22 (81%), Positives = 19/22 (86%) Frame = -3 Query: 68 KWLYSLPVNSISTWEGFVVIFL 3 KWLYSLP NSISTWE FV +FL Sbjct: 92 KWLYSLPTNSISTWEEFVTVFL 113 >gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis] Length = 279 Score = 104 bits (260), Expect(2) = 2e-27 Identities = 47/85 (55%), Positives = 65/85 (76%) Frame = -1 Query: 322 LKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVCAL 143 L D CYP R++ PSCI LP NG +FE++ +INMLPKF G++ ED Y+FI +FEEVC + Sbjct: 9 LHDMCYPIRNAIPSCIRLPETNGISFELRPQYINMLPKFLGNKTEDAYIFISEFEEVCIM 68 Query: 142 QKIQQLTEDSIRLRLINFALKEDAK 68 K+++L ED+++LR I FALK+ AK Sbjct: 69 IKMRELNEDAVKLRFIPFALKDKAK 93 Score = 42.7 bits (99), Expect(2) = 2e-27 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = -3 Query: 68 KWLYSLPVNSISTWEGFVVIFL 3 KWLYSLP NSISTW+ FV +FL Sbjct: 94 KWLYSLPTNSISTWDEFVTVFL 115 >emb|CAN72315.1| hypothetical protein VITISV_037426 [Vitis vinifera] Length = 635 Score = 69.7 bits (169), Expect = 2e-10 Identities = 37/87 (42%), Positives = 54/87 (62%) Frame = -1 Query: 328 VALKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVC 149 ++++DR YP R S PSCI +PP+ I+ H + +LP F G E E+PY I +FEEVC Sbjct: 22 LSMRDRMYPPRMSSPSCI-VPPLE--QLIIRPHIVPLLPNFHGMESENPYAHIKEFEEVC 78 Query: 148 ALQKIQQLTEDSIRLRLINFALKEDAK 68 + + D +RL+L F LK++AK Sbjct: 79 NTFREGGASIDLMRLKLFPFTLKDEAK 105 >emb|CAN69415.1| hypothetical protein VITISV_026852 [Vitis vinifera] Length = 1073 Score = 68.9 bits (167), Expect = 4e-10 Identities = 37/87 (42%), Positives = 54/87 (62%) Frame = -1 Query: 328 VALKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVC 149 ++++DR +P R S PSCI LPP+ I+ H + +LP F G E E+PY I +FEEVC Sbjct: 219 LSMRDRMHPPRMSAPSCI-LPPLE--QLVIRPHIVPLLPNFHGMESENPYAHIKEFEEVC 275 Query: 148 ALQKIQQLTEDSIRLRLINFALKEDAK 68 + + D +RL+L +F LK+ AK Sbjct: 276 NTFREGGASIDLMRLKLFSFTLKDKAK 302 >emb|CAN64587.1| hypothetical protein VITISV_032880 [Vitis vinifera] Length = 261 Score = 68.6 bits (166), Expect = 5e-10 Identities = 38/87 (43%), Positives = 54/87 (62%) Frame = -1 Query: 328 VALKDRCYPTRSSQPSCITLPPVNGNNFEIKGHHINMLPKFAGSEGEDPYLFIHKFEEVC 149 ++++DR +P R S PSCI LPP+ I+ H + +LP F G E E+PY I +FEEVC Sbjct: 106 LSMRDRMHPPRMSAPSCI-LPPLE--QLVIRPHIVPLLPTFHGMESENPYSHIKEFEEVC 162 Query: 148 ALQKIQQLTEDSIRLRLINFALKEDAK 68 + + D +RL+L FALK+ AK Sbjct: 163 NTFREGVASIDLMRLKLFPFALKDKAK 189