BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041581
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat...    93   3e-17
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...    77   1e-12
ref|NP_196258.1| pentatricopeptide repeat-containing protein [Ar...    74   2e-11

>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/86 (47%), Positives = 64/86 (74%)
 Frame = -1

Query: 302 VFKSMEEKGMMITPKFYTIYIKELCKVAMTDEIIKVLKEMKTKRVFIGDKTYKGILTYLE 123
           VF SM+E+G+  T K Y+++IKELCK++ TDE+IKVL EM+  ++ IGD+ +  +++YLE
Sbjct: 506 VFNSMQERGIRATWKSYSVFIKELCKISRTDEVIKVLNEMQASKIIIGDEVFNWVISYLE 565

Query: 122 KRREMDKVEEVKQMQISSTFYVEEGE 45
           K+ E + V++V QMQ +  FY +E E
Sbjct: 566 KKGETEMVKKVMQMQRTCKFYPQEHE 591


>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/99 (41%), Positives = 66/99 (66%)
 Frame = -1

Query: 302 VFKSMEEKGMMITPKFYTIYIKELCKVAMTDEIIKVLKEMKTKRVFIGDKTYKGILTYLE 123
           VF++ME+KG+  T K Y+I+IKELCKV+ TDEIIKVL +M+  ++FI D+ ++ +++ +E
Sbjct: 505 VFETMEDKGIKPTWKSYSIFIKELCKVSRTDEIIKVLGKMQASKMFICDEIFEWVISCME 564

Query: 122 KRREMDKVEEVKQMQISSTFYVEEGEEYTTDFSCRMQLN 6
           ++ EMD + +VKQM      +    E    D S   +L+
Sbjct: 565 RKGEMDNIRKVKQMHRICRLHSLNDEVSRNDLSREEELH 603


>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/99 (41%), Positives = 65/99 (65%)
 Frame = -1

Query: 302 VFKSMEEKGMMITPKFYTIYIKELCKVAMTDEIIKVLKEMKTKRVFIGDKTYKGILTYLE 123
           VF++ME+KG+  T K Y+I+IKELCKV  TDEIIKVL +M+  ++FI D+ ++ +++ +E
Sbjct: 505 VFETMEDKGIKPTWKSYSIFIKELCKVLRTDEIIKVLGKMQASKMFICDEIFEWVISCME 564

Query: 122 KRREMDKVEEVKQMQISSTFYVEEGEEYTTDFSCRMQLN 6
           ++ EMD + +VKQM      +    E    D S   +L+
Sbjct: 565 RKGEMDNIRKVKQMHRICRLHSLNDEVTRNDLSREEELH 603


>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/75 (46%), Positives = 56/75 (74%)
 Frame = -1

Query: 302 VFKSMEEKGMMITPKFYTIYIKELCKVAMTDEIIKVLKEMKTKRVFIGDKTYKGILTYLE 123
           VF +M++KG   T K Y+I+IKELC+V+ TDEI+KVL +M+  ++FI +  +   + ++E
Sbjct: 511 VFNTMKDKGANPTWKSYSIFIKELCRVSRTDEILKVLYKMQASKIFINNDIFNLAIAFME 570

Query: 122 KRREMDKVEEVKQMQ 78
           K+ E+D V++VKQMQ
Sbjct: 571 KKGEVDNVQKVKQMQ 585


>ref|NP_196258.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171850|sp|Q9FNG8.1|PP366_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g06400, mitochondrial; Flags: Precursor
           gi|9758420|dbj|BAB08962.1| unnamed protein product
           [Arabidopsis thaliana] gi|332003627|gb|AED91010.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1030

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 11/105 (10%)
 Frame = -1

Query: 302 VFKSMEEKGMMITPKFYTIYIKELCKVAMTDEIIKVLKEMKTKRVFIGDKTYKGILTYLE 123
           VF SMEEKG+  T K Y+I++KELC+ +  DEIIK+  +M   ++ I D  +  +++ +E
Sbjct: 490 VFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSME 549

Query: 122 KRREMDKVEEVKQMQISSTFYVEE-----------GEEYTTDFSC 21
           K  E +K+  +K++Q  S  Y +E            EE   D++C
Sbjct: 550 KNGEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNC 594