BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041575
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]   156   1e-36
emb|CBI38358.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002522388.1| pentatricopeptide repeat-containing protein,...   141   5e-32
ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31

>ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 616

 Score =  158 bits (400), Expect = 4e-37
 Identities = 73/115 (63%), Positives = 97/115 (84%)
 Frame = -3

Query: 346 IEINGVKTDIYVRNSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHSA 167
           IEI GVK DI VRN+LVDMYAKCG L++AQA+FDR +++NVVSWT+M++AYA+HG    A
Sbjct: 215 IEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVA 274

Query: 166 KRFFDQMPLKNVVTWNSMISCYIQEGCFSEALELFFKMCDLKYIPDETTLVSVIS 2
           ++ FDQMP KNVV+WNSMISCY++EG + EAL+LF KM + + +PDE TLVS+++
Sbjct: 275 RQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 329



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
 Frame = -3

Query: 349 YIEINGVKTDIYVRNSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHS 170
           YI  N     + + NSL+DMYAKCG + TA  +F  M  +N+VSW  ++ A A HG    
Sbjct: 346 YILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLE 405

Query: 169 AKRFFDQM----PLKNVVTWNSMISCYIQEGCFSEALELFFKMCDLKYIPDE 26
           A + F++M     L + +T   ++S     G     L  F +M  +  +P E
Sbjct: 406 AIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPRE 457


>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
          Length = 688

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/115 (62%), Positives = 96/115 (83%)
 Frame = -3

Query: 346 IEINGVKTDIYVRNSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHSA 167
           IEI GVK DI VRN+L DMYAKCG L++AQA+FDR +++NVVSWT+M++AYA+HG    A
Sbjct: 287 IEITGVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVA 346

Query: 166 KRFFDQMPLKNVVTWNSMISCYIQEGCFSEALELFFKMCDLKYIPDETTLVSVIS 2
           ++ FDQMP KNVV+WNSMISCY++EG + EAL+LF KM + + +PDE TLVS+++
Sbjct: 347 RQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 401



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = -3

Query: 349 YIEINGVKTDIYVRNSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHS 170
           YI  N     + + NSL+DMYAKCG + TA  +F  M  +N+VSW  ++ A A HG    
Sbjct: 418 YILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLE 477

Query: 169 AKRFFDQM----PLKNVVTWNSMISCYIQEGCFSEALELFFKM 53
           A + F++M     L + +T   ++S     G     L  F +M
Sbjct: 478 AIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRM 520


>emb|CBI38358.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  148 bits (373), Expect = 5e-34
 Identities = 67/107 (62%), Positives = 91/107 (85%)
 Frame = -3

Query: 322 DIYVRNSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHSAKRFFDQMP 143
           DI VRN+LVDMYAKCG L++AQA+FDR +++NVVSWT+M++AYA+HG    A++ FDQMP
Sbjct: 156 DIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMP 215

Query: 142 LKNVVTWNSMISCYIQEGCFSEALELFFKMCDLKYIPDETTLVSVIS 2
            KNVV+WNSMISCY++EG + EAL+LF KM + + +PDE TLVS+++
Sbjct: 216 GKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 262



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
 Frame = -3

Query: 349 YIEINGVKTDIYVRNSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHS 170
           YI  N     + + NSL+DMYAKCG + TA  +F  M  +N+VSW  ++ A A HG    
Sbjct: 279 YILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLE 338

Query: 169 AKRFFDQM----PLKNVVTWNSMISCYIQEGCFSEALELFFKMCDLKYIPDE 26
           A + F++M     L + +T   ++S     G     L  F +M  +  +P E
Sbjct: 339 AIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPRE 390


>ref|XP_002522388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538466|gb|EEF40072.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/116 (56%), Positives = 89/116 (76%)
 Frame = -3

Query: 349 YIEINGVKTDIYVRNSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHS 170
           YI+I G+K D+  RN+L+DMYAKCG L  A+ +F +M ++NVVSWT+M+TAYAK GL   
Sbjct: 214 YIQITGMKIDLVARNALIDMYAKCGALVLAERVFQQMPNKNVVSWTSMITAYAKQGLVEY 273

Query: 169 AKRFFDQMPLKNVVTWNSMISCYIQEGCFSEALELFFKMCDLKYIPDETTLVSVIS 2
           A++ FDQMP KNVV+WNSMIS Y+Q G   EAL+LF +M   + +P+E TL+SV+S
Sbjct: 274 ARKSFDQMPEKNVVSWNSMISSYVQGGQCREALDLFHEMHSFRVVPNEATLLSVLS 329



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
 Frame = -3

Query: 307 NSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHSAKRFFDQMPLKNV- 131
           NSL+DMYAKCG L  A  +F+ M ++N+VSW  ++ A A HG    A   F +M    V 
Sbjct: 360 NSLIDMYAKCGALRIAIDVFNEMPNKNLVSWNVIIGALALHGYGVEAVELFRKMQAAGVW 419

Query: 130 ---VTWNSMISCYIQEGCFSEALELFFKMCDL 44
              +T+  ++S     G     L  F KM  +
Sbjct: 420 PDEITFMGLLSACSHSGLVDSGLYYFDKMSSI 451


>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  139 bits (351), Expect = 2e-31
 Identities = 64/116 (55%), Positives = 89/116 (76%)
 Frame = -3

Query: 349 YIEINGVKTDIYVRNSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHS 170
           YI I GV+ D  V N+L+DMYAKCG+L  A+ +FD+M D++VVSWT+MV AYA  GL  +
Sbjct: 263 YIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVEN 322

Query: 169 AKRFFDQMPLKNVVTWNSMISCYIQEGCFSEALELFFKMCDLKYIPDETTLVSVIS 2
           A + F+ MP+KNVV+WNS+I C +QEG ++EA+ELF +MC    +PD+ TLVS++S
Sbjct: 323 AVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILS 378



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
 Frame = -3

Query: 349 YIEINGVKTDIYVRNSLVDMYAKCGYLNTAQALFDRMEDRNVVSWTTMVTAYAKHGLTHS 170
           YI  N +   + + NSL+DMYAKCG L TA  +F  M ++NVVSW  ++ A A HG    
Sbjct: 395 YICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEE 454

Query: 169 AKRFFDQMPLKNV----VTWNSMISCYIQEG 89
           A   F  M    +    +T+  ++S     G
Sbjct: 455 AIEMFKSMQASGLYPDEITFTGLLSACSHSG 485