BLASTX nr result

ID: Cnidium21_contig00041573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041573
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    68   9e-10
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...    68   9e-10
ref|XP_002306134.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003604006.1| Flavonol synthase/flavanone 3-hydroxylase [M...    59   5e-07
ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815...    58   9e-07

>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
 Frame = +2

Query: 2    SGFSRRGRDPISLGSGD--VNNSWRGVRNNSSMNGKFNRNLSMKTLANKVEDAPLGIG-I 172
            + F RR R+P+S G G   +N+SW G RN S+ N   +RNLS K  AN+ +DA +G G I
Sbjct: 764  TSFGRRTREPVSPGKGGSHLNDSWSGTRNFSNTNRDMSRNLSGKGFANQGDDA-IGSGEI 822

Query: 173  STDNSWNHGRGSQTEKLNILDNPTLATSSEALGLNSTSSAKSDS 304
              + SW HGR    +K +  D   ++ SSE    N+ S A S+S
Sbjct: 823  INETSWGHGRERDVKKTSKWDK-QVSPSSEITARNALSGAASES 865


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
 Frame = +2

Query: 2    SGFSRRGRDPISLGSGD--VNNSWRGVRNNSSMNGKFNRNLSMKTLANKVEDAPLGIG-I 172
            + F RR R+P+S G G   +N+SW G RN S+ N   +RNLS K  AN+ +DA +G G I
Sbjct: 764  TSFGRRTREPVSPGKGGSHLNDSWSGTRNFSNTNRDMSRNLSGKGFANQGDDA-IGSGEI 822

Query: 173  STDNSWNHGRGSQTEKLNILDNPTLATSSEALGLNSTSSAKSDS 304
              + SW HGR    +K +  D   ++ SSE    N+ S A S+S
Sbjct: 823  INETSWGHGRERDVKKTSKWDK-QVSPSSEITARNALSGAASES 865


>ref|XP_002306134.1| predicted protein [Populus trichocarpa] gi|222849098|gb|EEE86645.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
 Frame = +2

Query: 2   SGFSRRGRDPISLGSGDV--NNSWRGVRNNSSMNGKFNRNLSMKTLANKVEDAPLGIGIS 175
           SGFSR+GR+PIS   G    N++W G ++ SS N + +RNLS K  ++K +D   G  ++
Sbjct: 63  SGFSRKGREPISPRKGGFTSNDTWGGSKSYSSTNRELSRNLSDKGFSSKGDDIGGGESVN 122

Query: 176 TDNSWNHGRGSQTEKLNILDNPTLATSSEALGLNSTSSAKS 298
            +N W  GR  QT++    ++  ++ S   + L  + S  S
Sbjct: 123 -ENFWGQGREKQTQQSQSTNSTVISESVPGIALEISPSTPS 162


>ref|XP_003604006.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula]
            gi|355493054|gb|AES74257.1| Flavonol synthase/flavanone
            3-hydroxylase [Medicago truncatula]
          Length = 1942

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2    SGFSRRGRDPISLGSGDVNN-SWRGVRNNSSMNGKFNRNLSMKTLANKVEDAPLGIGIST 178
            S F R+GR+  S  SG +++ SW G RN S MN + +RNLS K  + K +D      +  
Sbjct: 1308 SAFGRKGREIASPRSGSISSDSWSGTRNYSPMNQELSRNLSNKGFSVKGDDVSNATELLN 1367

Query: 179  DNSWNHGRGSQTEKLNILDNPTLATSSEALGLNSTSS-AKSDSFSH 313
            D+ ++ GR  +++  N  D   L +SS   G  ST     S+SFS+
Sbjct: 1368 DSQFHQGRDKESQLSNSWDRQKLLSSSLENGGKSTRPLVASESFSN 1413


>ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
          Length = 1421

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2    SGFSRRGRDPISLGSGDVNN-SWRGVRNNSSMNGKFNRNLSMKTLANKVEDAPLGIGIST 178
            + F RRGRD +S  SG ++N SW G RN S++N +  RNLS K  + K ++A        
Sbjct: 738  TAFGRRGRDIVSPRSGSISNDSWSGTRNYSNVNHELGRNLSNKGFSIKGDNASNANEALN 797

Query: 179  DNSWNHGRGSQTEKLNILDNPTLATSSEALGLNSTSSAKSDSFS 310
            D   + GR  +++  N  +   L+++ E+   N+     S+SFS
Sbjct: 798  DAQLHRGRDRESQLSNSWERQKLSSTLESGAKNTQPLVASESFS 841


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