BLASTX nr result

ID: Cnidium21_contig00041536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041536
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002535138.1| conserved hypothetical protein [Ricinus comm...    39   1e-05

>ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|222865651|gb|EEF02782.1|
           predicted protein [Populus trichocarpa]
          Length = 83

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/72 (56%), Positives = 48/72 (66%)
 Frame = -2

Query: 226 MTASKIDIYIYTRLRLSRTVFRKK*PT*VEGRALLSFNPTILFIVVGALCTYSLYDKQVN 47
           MTASK +I+ +    L      KK PT  +GRAL  FN TIL IVV  +CTYSLYDKQVN
Sbjct: 1   MTASKRNIHGHGYPGLCSG---KKWPTRKKGRALSCFNSTILLIVV--VCTYSLYDKQVN 55

Query: 46  GPGARRTERFIK 11
           G  A RT++FIK
Sbjct: 56  GVSAWRTKQFIK 67


>ref|XP_002535138.1| conserved hypothetical protein [Ricinus communis]
          gi|223523943|gb|EEF27244.1| conserved hypothetical
          protein [Ricinus communis]
          Length = 57

 Score = 38.5 bits (88), Expect(2) = 1e-05
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -2

Query: 70 SLYDKQVNGPGARRTERFIK 11
          SLYDKQVNG GA RTERFIK
Sbjct: 31 SLYDKQVNGAGAWRTERFIK 50



 Score = 35.8 bits (81), Expect(2) = 1e-05
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -1

Query: 197 IYTVTVISDCVPEKVAYL 144
           IYTV VI DCVPEKVAYL
Sbjct: 8   IYTVMVIPDCVPEKVAYL 25


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