BLASTX nr result

ID: Cnidium21_contig00041522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041522
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like ex...    79   4e-13
ref|XP_002323311.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002526721.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
ref|XP_002283404.1| PREDICTED: uncharacterized protein LOC100252...    70   2e-10
gb|AFK44021.1| unknown [Medicago truncatula]                           68   7e-10

>ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like
           [Cucumis sativus]
          Length = 1159

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/62 (69%), Positives = 50/62 (80%)
 Frame = -3

Query: 314 MLQLFFAVAFSAVPLTLYVPPIRNLCLFVDTVEQVFHHTAGVFTHQLRPQLRLALSRPLF 135
           MLQLFFAVAFSAVPLTLYVPPIR+L LFV+T+E + HHTA + T +  P+ RLA SR LF
Sbjct: 1   MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTA-IHTIRAYPRFRLAFSR-LF 58

Query: 134 TS 129
            S
Sbjct: 59  AS 60


>ref|XP_002323311.1| predicted protein [Populus trichocarpa] gi|222867941|gb|EEF05072.1|
           predicted protein [Populus trichocarpa]
          Length = 66

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/57 (64%), Positives = 46/57 (80%)
 Frame = -3

Query: 314 MLQLFFAVAFSAVPLTLYVPPIRNLCLFVDTVEQVFHHTAGVFTHQLRPQLRLALSR 144
           MLQLFFAVAFSAVPLTLYVPPIR+L LFV+T+E V   T+ ++T +  P++RL  SR
Sbjct: 1   MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETMEDVLRQTS-LYTVRAYPRIRLVFSR 56


>ref|XP_002526721.1| conserved hypothetical protein [Ricinus communis]
           gi|223533910|gb|EEF35635.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 93

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = -3

Query: 314 MLQLFFAVAFSAVPLTLYVPPIRNLCLFVDTVEQVFHHTAGVFTHQLRPQLRLALSR 144
           MLQ+FFAVAFSAVPLTLYVPPIR+L LF++T+E++   +   +T Q  P++RLA SR
Sbjct: 1   MLQIFFAVAFSAVPLTLYVPPIRSLNLFLETIEELLRQSTS-YTIQAYPRIRLAFSR 56


>ref|XP_002283404.1| PREDICTED: uncharacterized protein LOC100252006 [Vitis vinifera]
          Length = 66

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = -3

Query: 314 MLQLFFAVAFSAVPLTLYVPPIRNLCLFVDTVEQVFHHTAGVFTHQLRPQLRLALSRPL 138
           MLQL FAVAFSAVPLTLYVPPIR+L LFV+TVE +F  TA V+T     ++RLA SR L
Sbjct: 1   MLQLLFAVAFSAVPLTLYVPPIRSLNLFVETVETLFRQTA-VYTLGAYLRVRLAFSRIL 58


>gb|AFK44021.1| unknown [Medicago truncatula]
          Length = 67

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/59 (57%), Positives = 46/59 (77%)
 Frame = -3

Query: 314 MLQLFFAVAFSAVPLTLYVPPIRNLCLFVDTVEQVFHHTAGVFTHQLRPQLRLALSRPL 138
           MLQLFF VAFS VPLTLY+PPIR+L LFV+T+E V   +   +++++ P+LR+A SR L
Sbjct: 1   MLQLFFTVAFSVVPLTLYIPPIRSLNLFVETMESVMREST-TYSNRIYPRLRIAWSRML 58


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