BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041518
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   186   1e-45
gb|AAD33582.1|AF132014_1 RING-H2 zinc finger protein ATL4 [Arabi...   167   8e-40
ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arab...   166   2e-39
gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsi...   165   3e-39
ref|NP_191581.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis t...   165   3e-39

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  186 bits (473), Expect = 1e-45
 Identities = 108/175 (61%), Positives = 124/175 (70%), Gaps = 9/175 (5%)
 Frame = +2

Query: 5   DTLPLFTFSSVKGNIVS--GDCAVCLSKFESQDQLRLLPLCCHAFHVACIDTWLTSNQTC 178
           D+LPLFTF SV+G   S  GDCAVCLSKFE  DQLRLLP+CCHAFH  CIDTWL SNQTC
Sbjct: 102 DSLPLFTFGSVRGRNSSSEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTC 161

Query: 179 PLCRSTIHPTESDVLDKILNSVSNDNVGNSFRIEIGSIS-RRTDSISNDNRRSYSIGSFD 355
           PLCRS I  TE+D +  IL S    N G+SFRIE+GS+S RR+ S S + RRSYS+GSFD
Sbjct: 162 PLCRSPIFATEADFMKAILAST---NAGDSFRIELGSVSRRRSASESGEARRSYSVGSFD 218

Query: 356 YIVDDAGYELSRASTDHRREPSEAT-SNVDKDSVGA-----PVMPPGESLAAEVA 502
           YIVD    E++ AST HRR  SE++ +  DKD  GA        PPG S AAEVA
Sbjct: 219 YIVDHES-EVTVAST-HRRGGSESSAAEKDKDDAGAQSNQLAPEPPGPSTAAEVA 271


>gb|AAD33582.1|AF132014_1 RING-H2 zinc finger protein ATL4 [Arabidopsis thaliana]
          Length = 326

 Score =  167 bits (423), Expect = 8e-40
 Identities = 90/172 (52%), Positives = 115/172 (66%), Gaps = 7/172 (4%)
 Frame = +2

Query: 5   DTLPLFTFSSV---KGNIVSGDCAVCLSKFESQDQLRLLPLCCHAFHVACIDTWLTSNQT 175
           D+LP+F FSSV     ++ SGDCAVCLSKFES+DQLRLLPLCCHAFH  CID WL SNQT
Sbjct: 87  DSLPIFKFSSVTRRSSSMNSGDCAVCLSKFESEDQLRLLPLCCHAFHADCIDIWLVSNQT 146

Query: 176 CPLCRSTIHPTESDVLDKILNSVSNDNVG-NSFRIEIGSISRRTDS---ISNDNRRSYSI 343
           CPLCRS +  +ESD++  +    SN+  G NSFR+EIGSISRR  +    S +  R+YSI
Sbjct: 147 CPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGSISRRRQTPIPESVEQHRTYSI 206

Query: 344 GSFDYIVDDAGYELSRASTDHRREPSEATSNVDKDSVGAPVMPPGESLAAEV 499
           GSFDYIVDD   E+S ++ +  ++    T+     +V         SLAA++
Sbjct: 207 GSFDYIVDDVDSEISESNFNRGKQEDATTTTATATAVTTNPTSFEASLAADI 258


>ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arabidopsis lyrata subsp.
           lyrata] gi|297324162|gb|EFH54583.1| hypothetical protein
           ARALYDRAFT_486491 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  166 bits (420), Expect = 2e-39
 Identities = 91/173 (52%), Positives = 118/173 (68%), Gaps = 8/173 (4%)
 Frame = +2

Query: 5   DTLPLFTFSSV---KGNIVSGDCAVCLSKFESQDQLRLLPLCCHAFHVACIDTWLTSNQT 175
           D+LP+F FSSV     +  SGDCAVCLSKFE ++QLRLLPLCCHAFH  CID WL SNQT
Sbjct: 96  DSLPIFKFSSVTRRSSSTNSGDCAVCLSKFEPEEQLRLLPLCCHAFHADCIDIWLVSNQT 155

Query: 176 CPLCRSTIHPTESDVLDKILNSVSNDNVG-NSFRIEIGSISRR-TDSISNDNRRSYSIGS 349
           CPLCRS +  +ESD++  ++   +N N G NSFR+EIGSISRR T+S+  +  RSYSIGS
Sbjct: 156 CPLCRSPLFASESDLMKSLVGGNNNSNGGENSFRLEIGSISRRQTESV--EQHRSYSIGS 213

Query: 350 FDYIVDDAGYELSRASTDH---RREPSEATSNVDKDSVGAPVMPPGESLAAEV 499
           FDYIVDD   E+S ++ +      +  +AT+     +V +       SLAA++
Sbjct: 214 FDYIVDDVDSEISESNFNRGSISAKQEDATTTTTATAVTSNPASFEASLAADI 266


>gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsis thaliana]
          Length = 273

 Score =  165 bits (418), Expect = 3e-39
 Identities = 89/172 (51%), Positives = 114/172 (66%), Gaps = 7/172 (4%)
 Frame = +2

Query: 5   DTLPLFTFSSV---KGNIVSGDCAVCLSKFESQDQLRLLPLCCHAFHVACIDTWLTSNQT 175
           D+LP+F FSSV     ++ SGDCAVCLSKFE +DQLRLLPLCCHAFH  CID WL SNQT
Sbjct: 34  DSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQT 93

Query: 176 CPLCRSTIHPTESDVLDKILNSVSNDNVG-NSFRIEIGSISRRTDS---ISNDNRRSYSI 343
           CPLCRS +  +ESD++  +    SN+  G NSFR+EIGSISRR  +    S +  R+YSI
Sbjct: 94  CPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGSISRRRQTPIPESVEQHRTYSI 153

Query: 344 GSFDYIVDDAGYELSRASTDHRREPSEATSNVDKDSVGAPVMPPGESLAAEV 499
           GSFDYIVDD   E+S ++ +  ++    T+     +V         SLAA++
Sbjct: 154 GSFDYIVDDVDSEISESNFNRGKQEDATTTTATATAVTTNPTSFEASLAADI 205


>ref|NP_191581.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
           gi|68565314|sp|Q9LY41.1|ATL4_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL4; AltName: Full=Protein
           ARABIDOPSIS TOXICOS EN LEVADURA 4; Short=Protein ATL4;
           AltName: Full=RING-H2 finger protein ATL4; AltName:
           Full=RING-H2 finger protein RHX1a
           gi|7576198|emb|CAB87859.1| RING-H2 zinc finger protein
           ATL4 [Arabidopsis thaliana] gi|66865934|gb|AAY57601.1|
           RING finger family protein [Arabidopsis thaliana]
           gi|114050661|gb|ABI49480.1| At3g60220 [Arabidopsis
           thaliana] gi|332646504|gb|AEE80025.1| E3
           ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
          Length = 334

 Score =  165 bits (418), Expect = 3e-39
 Identities = 89/172 (51%), Positives = 114/172 (66%), Gaps = 7/172 (4%)
 Frame = +2

Query: 5   DTLPLFTFSSV---KGNIVSGDCAVCLSKFESQDQLRLLPLCCHAFHVACIDTWLTSNQT 175
           D+LP+F FSSV     ++ SGDCAVCLSKFE +DQLRLLPLCCHAFH  CID WL SNQT
Sbjct: 95  DSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQT 154

Query: 176 CPLCRSTIHPTESDVLDKILNSVSNDNVG-NSFRIEIGSISRRTDS---ISNDNRRSYSI 343
           CPLCRS +  +ESD++  +    SN+  G NSFR+EIGSISRR  +    S +  R+YSI
Sbjct: 155 CPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGSISRRRQTPIPESVEQHRTYSI 214

Query: 344 GSFDYIVDDAGYELSRASTDHRREPSEATSNVDKDSVGAPVMPPGESLAAEV 499
           GSFDYIVDD   E+S ++ +  ++    T+     +V         SLAA++
Sbjct: 215 GSFDYIVDDVDSEISESNFNRGKQEDATTTTATATAVTTNPTSFEASLAADI 266