BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041502
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_002322139.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
ref|XP_002511477.1| pentatricopeptide repeat-containing protein,...    84   1e-14

>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 53/96 (55%), Positives = 59/96 (61%)
 Frame = +3

Query: 138 TKMTLTQHSIFFFPTKTLINTPLFPIKKPSFSDNXXXXXXXXXXXXAKGRGELILGNPSV 317
           T  TL + S         +N  LFP K   F               AK + EL+LGNPSV
Sbjct: 13  TSATLLRPSHVNLRPNPNLNRHLFPAKATDFF-GYQRILASAARIRAKPK-ELVLGNPSV 70

Query: 318 TVEKGKYTYDVETLIDKLSSLPPRGSIARCLDAFKN 425
           TVEKGKY+YDVETLI+KLSSLPPRGSIARCLD FKN
Sbjct: 71  TVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKN 106


>ref|XP_002322139.1| predicted protein [Populus trichocarpa] gi|222869135|gb|EEF06266.1|
           predicted protein [Populus trichocarpa]
          Length = 866

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = +3

Query: 291 ELILGNPSVTVEKGKYTYDVETLIDKLSSLPPRGSIARCLDAFKN 425
           EL+LGNPSV VEKGKY+YDVETLI+KLSSLPPRGSIARCLD FKN
Sbjct: 59  ELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKN 103


>ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/73 (61%), Positives = 54/73 (73%)
 Frame = +3

Query: 207 FPIKKPSFSDNXXXXXXXXXXXXAKGRGELILGNPSVTVEKGKYTYDVETLIDKLSSLPP 386
           F +++  FSD+            AK + +L+LGNPSV VEKGKY+YDVETLI+KLSSLPP
Sbjct: 38  FSVRRRFFSDDWRLSSDVGKVR-AKAK-DLVLGNPSVIVEKGKYSYDVETLINKLSSLPP 95

Query: 387 RGSIARCLDAFKN 425
           RGSIARCLD FKN
Sbjct: 96  RGSIARCLDIFKN 108


>ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/73 (61%), Positives = 54/73 (73%)
 Frame = +3

Query: 207 FPIKKPSFSDNXXXXXXXXXXXXAKGRGELILGNPSVTVEKGKYTYDVETLIDKLSSLPP 386
           F +++  FSD+            AK + +L+LGNPSV VEKGKY+YDVETLI+KLSSLPP
Sbjct: 38  FSVRRRFFSDDWRLSSDVGKVR-AKAK-DLVLGNPSVIVEKGKYSYDVETLINKLSSLPP 95

Query: 387 RGSIARCLDAFKN 425
           RGSIARCLD FKN
Sbjct: 96  RGSIARCLDIFKN 108


>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 754

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = +3

Query: 291 ELILGNPSVTVEKGKYTYDVETLIDKLSSLPPRGSIARCLDAFKN 425
           EL+LGNPSV VEKGKY+YDVETLI+KLSSLPPRGSIARCL+ FKN
Sbjct: 58  ELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLEIFKN 102