BLASTX nr result

ID: Cnidium21_contig00041487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041487
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glyc...   129   3e-28
gb|AFL69960.1| polygalacturonase [Brassica napus]                     124   1e-26

>ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/106 (59%), Positives = 86/106 (81%)
 Frame = +2

Query: 2   IDIVQLDERTSKFKDVKQVIVDRNNVKGMNTKSTIARGTVEGNDSSWTVDLSKDLLFPNL 181
           I+IVQLD+    FK + QV+VDRNNV GMN K+T+A+G+V+GN +SWT+D S  LLFPNL
Sbjct: 380 IEIVQLDQSKGPFKQIDQVVVDRNNVNGMNLKATVAKGSVQGNGTSWTIDFSPVLLFPNL 439

Query: 182 IKSVQYSLQATGSQFPNHALRSVTDNRIVITTDRVLPASVTVTVDQ 319
           I  VQYS+ ++G+ FP+HALR+V++NR+VI +D  +PASV VTV+Q
Sbjct: 440 IDHVQYSVSSSGTLFPSHALRNVSENRVVIESDVAVPASVFVTVNQ 485


>ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|222869958|gb|EEF07089.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/106 (59%), Positives = 83/106 (78%)
 Frame = +2

Query: 2   IDIVQLDERTSKFKDVKQVIVDRNNVKGMNTKSTIARGTVEGNDSSWTVDLSKDLLFPNL 181
           I+IVQLD+    FK + QV+VDRNNV+GMN K+T ARG+ +GN +SWTVD S  LLFPNL
Sbjct: 227 IEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATAARGSAQGNGTSWTVDFSPVLLFPNL 286

Query: 182 IKSVQYSLQATGSQFPNHALRSVTDNRIVITTDRVLPASVTVTVDQ 319
           I  VQYSL ++G++FP+HALR+V+ NR+VI +D  + A V VTV+Q
Sbjct: 287 INHVQYSLSSSGTKFPSHALRNVSQNRVVIESDIAVAARVFVTVEQ 332


>ref|XP_002335114.1| predicted protein [Populus trichocarpa]
           gi|224137804|ref|XP_002326444.1| predicted protein
           [Populus trichocarpa] gi|222832896|gb|EEE71373.1|
           predicted protein [Populus trichocarpa]
           gi|222833766|gb|EEE72243.1| predicted protein [Populus
           trichocarpa]
          Length = 496

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/106 (59%), Positives = 83/106 (78%)
 Frame = +2

Query: 2   IDIVQLDERTSKFKDVKQVIVDRNNVKGMNTKSTIARGTVEGNDSSWTVDLSKDLLFPNL 181
           I+IVQLD+    FK + QV+VDRNNV+GMN K+T ARG+ +GN +SWTVD S  LLFPNL
Sbjct: 387 IEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATAARGSAQGNGTSWTVDFSPVLLFPNL 446

Query: 182 IKSVQYSLQATGSQFPNHALRSVTDNRIVITTDRVLPASVTVTVDQ 319
           I  VQYSL ++G++FP+HALR+V+ NR+VI +D  + A V VTV+Q
Sbjct: 447 INHVQYSLSSSGTKFPSHALRNVSQNRVVIESDIAVAARVFVTVEQ 492


>ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glycine max]
          Length = 472

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/106 (56%), Positives = 85/106 (80%)
 Frame = +2

Query: 2   IDIVQLDERTSKFKDVKQVIVDRNNVKGMNTKSTIARGTVEGNDSSWTVDLSKDLLFPNL 181
           ++IVQLD+  S F+ + QVIVDRN  +GM  K+T+A+ +++GN +SW+VD +  LLFPNL
Sbjct: 363 VEIVQLDQSNSPFQQIDQVIVDRNIARGMKLKATVAKMSMQGNGTSWSVDFNNVLLFPNL 422

Query: 182 IKSVQYSLQATGSQFPNHALRSVTDNRIVITTDRVLPASVTVTVDQ 319
           IK+VQYSL ++GS FPNHALR+V++NR+VI T+  + A+V VTVDQ
Sbjct: 423 IKNVQYSLSSSGSTFPNHALRNVSENRVVIETNEAVAANVFVTVDQ 468


>gb|AFL69960.1| polygalacturonase [Brassica napus]
          Length = 475

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/107 (57%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   IDIVQLDERTSKFKDVKQVIVDRNNVKGMNTKSTIARGTVEGNDSSWTVDLSKDLLFPNL 181
           + IVQLD+    F++V QV+VDRNNV GM T+ST+A+ +V+GN +SWTVD ++ LLFPNL
Sbjct: 369 VQIVQLDQTNKAFENVDQVVVDRNNVNGMATRSTVAKASVDGNGTSWTVDFNQVLLFPNL 428

Query: 182 IKSVQYSLQA-TGSQFPNHALRSVTDNRIVITTDRVLPASVTVTVDQ 319
           IK VQY+L A  G+ FP HA+R+V+DNR+V+ T+  + A V VTVDQ
Sbjct: 429 IKHVQYTLVARDGNAFPIHAVRNVSDNRVVVQTNAPVTAQVYVTVDQ 475


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