BLASTX nr result

ID: Cnidium21_contig00041383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041383
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...    81   1e-13
emb|CAN61651.1| hypothetical protein VITISV_014602 [Vitis vinifera]    81   1e-13
ref|XP_002521028.1| ring finger protein, putative [Ricinus commu...    75   4e-12
emb|CBI32123.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002511433.1| ring finger protein, putative [Ricinus commu...    72   6e-11

>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/83 (53%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
 Frame = +3

Query: 6   CPSSRD-------KPVKGKIEPNSKSSIDGDFEGKKINNRSKGESFSVSKIWLWPKKDKF 164
           CP+  D       K +KG+      SS DGD EGKKI+  SK ESFSVSKIWLWPKK KF
Sbjct: 309 CPNRADAGSDAVVKLMKGRGGHTGNSSTDGDVEGKKISIGSKDESFSVSKIWLWPKKGKF 368

Query: 165 PDSADTHMXXXXXXXXFPWSIRT 233
           P S+DTH+        FPW+ RT
Sbjct: 369 PSSSDTHI-GPSVNVGFPWTERT 390


>emb|CAN61651.1| hypothetical protein VITISV_014602 [Vitis vinifera]
          Length = 326

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/83 (53%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
 Frame = +3

Query: 6   CPSSRD-------KPVKGKIEPNSKSSIDGDFEGKKINNRSKGESFSVSKIWLWPKKDKF 164
           CP+  D       K +KG+      SS DGD EGKKI+  SK ESFSVSKIWLWPKK KF
Sbjct: 242 CPNRADAGSDAVVKLMKGRGGHTGNSSTDGDVEGKKISIGSKDESFSVSKIWLWPKKGKF 301

Query: 165 PDSADTHMXXXXXXXXFPWSIRT 233
           P S+DTH+        FPW+ RT
Sbjct: 302 PSSSDTHI-GPSVNVGFPWTERT 323


>ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
           gi|223539865|gb|EEF41445.1| ring finger protein,
           putative [Ricinus communis]
          Length = 374

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/75 (54%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
 Frame = +3

Query: 24  KPVKGKIEPNSKSSID--GDFEGKKINNRSKGESFSVSKIWLWPKKDKFPDSADTHMXXX 197
           K VK K   N  +S +  GD EGKKIN RSKGESFSVSKIW W +K K P S+DT+M   
Sbjct: 300 KLVKSKNGQNGNTSSNDIGDAEGKKINIRSKGESFSVSKIWQWSRKGKLPSSSDTYMGSS 359

Query: 198 XXXXXFPWSIRTPVT 242
                 PWS RT  T
Sbjct: 360 PLAVGLPWSDRTHCT 374


>emb|CBI32123.3| unnamed protein product [Vitis vinifera]
          Length = 184

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +3

Query: 60  SSIDGDFEGKKINNRSKGESFSVSKIWLWPKKDKFPDSADTHM 188
           SS DGD EGKKI+  SK ESFSVSKIWLWPKK KFP S+DTH+
Sbjct: 99  SSTDGDVEGKKISIGSKDESFSVSKIWLWPKKGKFPSSSDTHI 141


>ref|XP_002511433.1| ring finger protein, putative [Ricinus communis]
           gi|223550548|gb|EEF52035.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/53 (62%), Positives = 42/53 (79%)
 Frame = +3

Query: 30  VKGKIEPNSKSSIDGDFEGKKINNRSKGESFSVSKIWLWPKKDKFPDSADTHM 188
           V+G+ E    S++DGD EGKKIN R++G+SFSVSKIWLW KK+KFP S  T+M
Sbjct: 300 VRGEYE---SSAVDGDVEGKKINGRTRGDSFSVSKIWLWSKKNKFPSSTTTNM 349


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