BLASTX nr result

ID: Cnidium21_contig00041301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041301
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16366.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002285414.1| PREDICTED: uncharacterized protein LOC100262...    72   6e-11
emb|CAN70550.1| hypothetical protein VITISV_002756 [Vitis vinifera]    72   6e-11
gb|AFK38242.1| unknown [Medicago truncatula]                           70   1e-10
ref|XP_002304016.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>emb|CBI16366.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
 Frame = -2

Query: 389 QVHFSVLVSRNLESNIKLWI*TC*RLMAMLMLEETDT-FILKVAMFLIVQALVYFILTNS 213
           Q H S L+         ++  TC     M  +E +    ++KV +F +VQ LV+ IL +S
Sbjct: 7   QTHISFLI---------IFFPTCKFSETMAFMEGSAADMLIKVVVFALVQGLVFLILKSS 57

Query: 212 SDVFSDNKLVKSLSFKPARTLSISRMIGAISDIPQGGEXXXXXXXXXXXTQ--EYSTMGE 39
           SDVFS NK+ +SLSFKPAR+ SI R++  ISD+P GGE               EY+T  E
Sbjct: 58  SDVFSKNKM-RSLSFKPARSASIRRILAVISDLPAGGEVSSRSSRGLLAPSTGEYATADE 116

Query: 38  D 36
           D
Sbjct: 117 D 117


>ref|XP_002285414.1| PREDICTED: uncharacterized protein LOC100262174 [Vitis vinifera]
          Length = 94

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
 Frame = -2

Query: 275 ILKVAMFLIVQALVYFILTNSSDVFSDNKLVKSLSFKPARTLSISRMIGAISDIPQGGEX 96
           ++KV +F +VQ LV+ IL +SSDVFS NK+ +SLSFKPAR+ SI R++  ISD+P GGE 
Sbjct: 12  LIKVVVFALVQGLVFLILKSSSDVFSKNKM-RSLSFKPARSASIRRILAVISDLPAGGEV 70

Query: 95  XXXXXXXXXXTQ--EYSTMGED 36
                         EY+T  ED
Sbjct: 71  SSRSSRGLLAPSTGEYATADED 92


>emb|CAN70550.1| hypothetical protein VITISV_002756 [Vitis vinifera]
          Length = 94

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
 Frame = -2

Query: 275 ILKVAMFLIVQALVYFILTNSSDVFSDNKLVKSLSFKPARTLSISRMIGAISDIPQGGEX 96
           ++KV +F +VQ LV+ IL +SSDVFS NK+ +SLSFKPAR+ SI R++  ISD+P GGE 
Sbjct: 12  LIKVVVFALVQVLVFLILKSSSDVFSKNKM-RSLSFKPARSASIRRILAVISDLPAGGEV 70

Query: 95  XXXXXXXXXXTQ--EYSTMGED 36
                         EY+T  ED
Sbjct: 71  SSRSSRGLLAPSTGEYATADED 92


>gb|AFK38242.1| unknown [Medicago truncatula]
          Length = 81

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/59 (61%), Positives = 48/59 (81%)
 Frame = -2

Query: 275 ILKVAMFLIVQALVYFILTNSSDVFSDNKLVKSLSFKPARTLSISRMIGAISDIPQGGE 99
           +LKVAMF++VQALVY IL+NSS++FS N + +S SFKPAR++SI RM+  +SD P  GE
Sbjct: 9   LLKVAMFVLVQALVYLILSNSSNIFSKN-IKRSNSFKPARSVSIRRMLAYLSDFPPEGE 66


>ref|XP_002304016.1| predicted protein [Populus trichocarpa] gi|222841448|gb|EEE78995.1|
           predicted protein [Populus trichocarpa]
          Length = 74

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/58 (60%), Positives = 47/58 (81%)
 Frame = -2

Query: 278 FILKVAMFLIVQALVYFILTNSSDVFSDNKLVKSLSFKPARTLSISRMIGAISDIPQG 105
           F++K+AMF++VQ LVY IL+ SS+VFS+NK  +S SFKPAR+LSI   + A+SDIP G
Sbjct: 11  FLIKLAMFVLVQVLVYLILSKSSNVFSENK-TRSFSFKPARSLSIRSFLDALSDIPLG 67


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